PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107435640 View in Genome Browser
Position	NC_063297.1:14011966-14016867 (+) 4901bp
Gene Type	gene
Gene Description (Protein Product)	Ubiquitin carboxyl-terminal hydrolase
Organism	Ziziphus jujuba
Also AS	AT4G17510

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC107435701 The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg; Phe; Tyr; Leu; and Glu adjacent to the leaving group at neutral or slightly basic pH

gene-LOC107435796 Threonine synthase

gene-LOC125420725 La-related protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003676	nucleic acid binding	MF
GO:0003723	RNA binding	MF
GO:0003729	mRNA binding	MF
GO:0003730	mRNA 3'-UTR binding	MF
GO:0003824	catalytic activity	MF
GO:0004300	enoyl-CoA hydratase activity	MF
GO:0004843	cysteine-type deubiquitinase activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005739	mitochondrion	CC
GO:0005829	cytosol	CC
GO:0006082	organic acid metabolic process	BP
GO:0006464	protein modification process	BP
GO:0006508	proteolysis	BP
GO:0006629	lipid metabolic process	BP
GO:0006631	fatty acid metabolic process	BP
GO:0006635	fatty acid beta-oxidation	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0008233	peptidase activity	MF
GO:0008234	cysteine-type peptidase activity	MF
GO:0009056	catabolic process	BP
GO:0009062	fatty acid catabolic process	BP
GO:0009987	cellular process	BP
GO:0016042	lipid catabolic process	BP
GO:0016054	organic acid catabolic process	BP
GO:0016579	protein deubiquitination	BP
GO:0016787	hydrolase activity	MF
GO:0016829	lyase activity	MF
GO:0016835	carbon-oxygen lyase activity	MF
GO:0016836	hydro-lyase activity	MF
GO:0019395	fatty acid oxidation	BP
GO:0019538	protein metabolic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0019783	ubiquitin-like protein peptidase activity	MF
GO:0030258	lipid modification	BP
GO:0032787	monocarboxylic acid metabolic process	BP
GO:0034440	lipid oxidation	BP
GO:0036211	protein modification process	BP
GO:0036459	cysteine-type deubiquitinase activity	MF
GO:0043170	macromolecule metabolic process	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043412	macromolecule modification	BP
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044242	cellular lipid catabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044255	cellular lipid metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044282	small molecule catabolic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046395	carboxylic acid catabolic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0070011	peptidase activity	MF
GO:0070646	protein modification by small protein removal	BP
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0071704	organic substance metabolic process	BP
GO:0072329	monocarboxylic acid catabolic process	BP
GO:0097159	organic cyclic compound binding	MF
GO:0101005	deubiquitinase activity	MF
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901575	organic substance catabolic process	BP