PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC107435781 View in Genome Browser
Position	NC_063295.1:10200721-10205816 (+) 5095bp
Gene Type	gene
Gene Description (Protein Product)	E3 ubiquitin-protein ligase
Organism	Ziziphus jujuba
Also AS	AT4G34370

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125421319 Ring finger protein

gene-LOC125418220 Pentatricopeptide repeat-containing protein

gene-LOC112493135 RPM1-interacting protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000151	ubiquitin ligase complex	CC
GO:0000209	protein polyubiquitination	BP
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004842	ubiquitin-protein transferase activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006464	protein modification process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009893	positive regulation of metabolic process	BP
GO:0009894	regulation of catabolic process	BP
GO:0009896	positive regulation of catabolic process	BP
GO:0009987	cellular process	BP
GO:0010604	positive regulation of macromolecule metabolic process	BP
GO:0016567	protein ubiquitination	BP
GO:0016740	transferase activity	MF
GO:0019222	regulation of metabolic process	BP
GO:0019538	protein metabolic process	BP
GO:0019787	ubiquitin-like protein transferase activity	MF
GO:0019899	enzyme binding	MF
GO:0030162	regulation of proteolysis	BP
GO:0031323	regulation of cellular metabolic process	BP
GO:0031325	positive regulation of cellular metabolic process	BP
GO:0031329	regulation of cellular catabolic process	BP
GO:0031331	positive regulation of cellular catabolic process	BP
GO:0031624	ubiquitin conjugating enzyme binding	MF
GO:0032268	regulation of protein metabolic process	BP
GO:0032270	positive regulation of protein metabolic process	BP
GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	BP
GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process	BP
GO:0032446	protein modification by small protein conjugation	BP
GO:0032991	protein-containing complex	CC
GO:0036211	protein modification process	BP
GO:0042176	regulation of protein catabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044390	ubiquitin-like protein conjugating enzyme binding	MF
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0045732	positive regulation of protein catabolic process	BP
GO:0045862	positive regulation of proteolysis	BP
GO:0048518	positive regulation of biological process	BP
GO:0048522	positive regulation of cellular process	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051173	positive regulation of nitrogen compound metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051247	positive regulation of protein metabolic process	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061136	regulation of proteasomal protein catabolic process	BP
GO:0061630	ubiquitin protein ligase activity	MF
GO:0061659	ubiquitin-like protein ligase activity	MF
GO:0065007	biological regulation	BP
GO:0070647	protein modification by small protein conjugation or removal	BP
GO:0071704	organic substance metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0140096	catalytic activity, acting on a protein	MF
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901800	positive regulation of proteasomal protein catabolic process	BP
GO:1902494	catalytic complex	CC
GO:1903050	regulation of proteolysis involved in protein catabolic process	BP
GO:1903052	positive regulation of proteolysis involved in protein catabolic process	BP
GO:1903362	regulation of protein catabolic process	BP
GO:1903364	positive regulation of protein catabolic process	BP
GO:1990234	transferase complex	CC
GO:2000058	regulation of ubiquitin-dependent protein catabolic process	BP
GO:2000060	positive regulation of ubiquitin-dependent protein catabolic process	BP