Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC107435920
View in Genome Browser
Position
NC_063292.1:30099760-30102861 (-)
3101bp
Gene Type
gene
Gene Description (Protein Product)
Metacaspase-1-like
Organism
Ziziphus jujuba
Also AS AT1G02170

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125418194 Component of the DNA topoisomerase VI involved in chromatin organization and progression of endoreduplication cycles. Relaxes both positive and negative superturns and exhibits a strong decatenase activity
gene-LOC125421187 nicotianamine
gene-LOC112490409 AMP deaminase
Regulatory gene
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein
gene-LOC107406554 Dof domain; zinc finger

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004175 endopeptidase activity MF
GO:0004197 cysteine-type endopeptidase activity MF
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0010941 regulation of cell death BP
GO:0010942 positive regulation of cell death BP
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0043067 regulation of programmed cell death BP
GO:0043068 positive regulation of programmed cell death BP
GO:0043170 macromolecule metabolic process BP
GO:0044238 primary metabolic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0065007 biological regulation BP
GO:0070011 peptidase activity MF
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP