Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC112489481
View in Genome Browser
Position
NC_063295.1:27664418-27666272 (-)
1854bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the uridine kinase family
Organism
Ziziphus jujuba
Also AS AT5G40870

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125418705 Adenylate isopentenyltransferase-like
gene-LOC112491050 Removes the phosphate from trehalose 6-phosphate to produce free trehalose
gene-LOC125421967 Fumarylacetoacetase N-terminal

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004845 uracil phosphoribosyltransferase activity MF
GO:0004849 uridine kinase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006109 regulation of carbohydrate metabolic process BP
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006206 pyrimidine nucleobase metabolic process BP
GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process BP
GO:0006213 pyrimidine nucleoside metabolic process BP
GO:0006220 pyrimidine nucleotide metabolic process BP
GO:0006221 pyrimidine nucleotide biosynthetic process BP
GO:0006222 UMP biosynthetic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008655 pyrimidine-containing compound salvage BP
GO:0009058 biosynthetic process BP
GO:0009112 nucleobase metabolic process BP
GO:0009116 nucleoside metabolic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009119 ribonucleoside metabolic process BP
GO:0009123 nucleoside monophosphate metabolic process BP
GO:0009124 nucleoside monophosphate biosynthetic process BP
GO:0009129 pyrimidine nucleoside monophosphate metabolic process BP
GO:0009130 pyrimidine nucleoside monophosphate biosynthetic process BP
GO:0009156 ribonucleoside monophosphate biosynthetic process BP
GO:0009161 ribonucleoside monophosphate metabolic process BP
GO:0009163 nucleoside biosynthetic process BP
GO:0009165 nucleotide biosynthetic process BP
GO:0009173 pyrimidine ribonucleoside monophosphate metabolic process BP
GO:0009174 pyrimidine ribonucleoside monophosphate biosynthetic process BP
GO:0009218 pyrimidine ribonucleotide metabolic process BP
GO:0009220 pyrimidine ribonucleotide biosynthetic process BP
GO:0009259 ribonucleotide metabolic process BP
GO:0009260 ribonucleotide biosynthetic process BP
GO:0009507 chloroplast CC
GO:0009536 plastid CC
GO:0009889 regulation of biosynthetic process BP
GO:0009987 cellular process BP
GO:0010138 pyrimidine ribonucleotide salvage BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010675 regulation of cellular carbohydrate metabolic process BP
GO:0010962 regulation of glucan biosynthetic process BP
GO:0016301 kinase activity MF
GO:0016310 phosphorylation BP
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0016763 pentosyltransferase activity MF
GO:0016772 transferase activity, transferring phosphorus-containing groups MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019205 nucleobase-containing compound kinase activity MF
GO:0019206 nucleoside kinase activity MF
GO:0019222 regulation of metabolic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019693 ribose phosphate metabolic process BP
GO:0019856 pyrimidine nucleobase biosynthetic process BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032262 pyrimidine nucleotide salvage BP
GO:0032881 regulation of polysaccharide metabolic process BP
GO:0032885 regulation of polysaccharide biosynthetic process BP
GO:0032950 regulation of beta-glucan metabolic process BP
GO:0032951 regulation of beta-glucan biosynthetic process BP
GO:0034404 nucleobase-containing small molecule biosynthetic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0042455 ribonucleoside biosynthetic process BP
GO:0043094 cellular metabolic compound salvage BP
GO:0043097 pyrimidine nucleoside salvage BP
GO:0043173 nucleotide salvage BP
GO:0043174 nucleoside salvage BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043255 regulation of carbohydrate biosynthetic process BP
GO:0043455 regulation of secondary metabolic process BP
GO:0044206 UMP salvage BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044283 small molecule biosynthetic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046049 UMP metabolic process BP
GO:0046112 nucleobase biosynthetic process BP
GO:0046131 pyrimidine ribonucleoside metabolic process BP
GO:0046132 pyrimidine ribonucleoside biosynthetic process BP
GO:0046134 pyrimidine nucleoside biosynthetic process BP
GO:0046390 ribose phosphate biosynthetic process BP
GO:0046483 heterocycle metabolic process BP
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0071704 organic substance metabolic process BP
GO:0072527 pyrimidine-containing compound metabolic process BP
GO:0072528 pyrimidine-containing compound biosynthetic process BP
GO:0080090 regulation of primary metabolic process BP
GO:0090407 organophosphate biosynthetic process BP
GO:1900376 regulation of secondary metabolite biosynthetic process BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901141 regulation of lignin biosynthetic process BP
GO:1901293 nucleoside phosphate biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901657 glycosyl compound metabolic process BP
GO:1901659 glycosyl compound biosynthetic process BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000762 regulation of phenylpropanoid metabolic process BP
GO:2000904 regulation of starch metabolic process BP
GO:2001006 regulation of cellulose biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00710 Carbon fixation in photosynthetic organisms -
map00240 Pyrimidine metabolism -
map00240 Pyrimidine metabolism -
map00040 Pentose and glucuronate interconversions -
map00030 Pentose phosphate pathway The pentose phosphate pathway is a process of glucose turnover that produces NADPH as reducing equivalents and pentoses as essential parts of nucleotides. There are two different phases in the pathway. One is irreversible oxidative phase in which glucose-6P is converted to ribulose-5P by oxidative decarboxylation, and NADPH is generated [MD:M00006]. The other is reversible non-oxidative phase in which phosphorylated sugars are interconverted to generate xylulose-5P, ribulose-5P, and ribose-5P [MD:M00007]. Phosphoribosyl pyrophosphate (PRPP) formed from ribose-5P [MD:M00005] is an activated compound used in the biosynthesis of histidine and purine/pyrimidine nucleotides. This pathway map also shows the Entner-Doudoroff pathway where 6-P-gluconate is dehydrated and then cleaved into pyruvate and glyceraldehyde-3P [MD:M00008].