Basic Information
Gene ID
gene-LOC112490641
Position
NC_063288.1:18404165-18408707 (+)
4542bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily
Organism
Also AS AT5G05340

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125422904 ATP synthase delta chain
gene-LOC125419482 Component of the cytochrome b6-f complex; which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI); cyclic electron flow around PSI; and state transitions
gene-LOC125419690 Ribulose bisphosphate carboxylase; large chain
Regulatory gene
gene-LOC107403266 AP2-like ethylene-responsive transcription factor
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00940 Phenylpropanoid biosynthesis Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.