Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC112491290
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Position
NC_063290.1:6393380-6397559 (+)
4179bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the ClpA ClpB family
Organism
Ziziphus jujuba
Also AS AT5G15450

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125423273 IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits; thus enhancing the availability of 30S subunits on which protein synthesis initiation begins
gene-LOC125421227 ATP-dependent Clp protease proteolytic subunit
gene-LOC125423826 ATP synthase subunit beta
Regulatory gene
gene-LOC107403266 AP2-like ethylene-responsive transcription factor
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0006950 response to stress BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009266 response to temperature stimulus BP
GO:0009408 response to heat BP
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0009628 response to abiotic stimulus BP
GO:0009657 plastid organization BP
GO:0009658 chloroplast organization BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0050896 response to stimulus BP
GO:0071840 cellular component organization or biogenesis BP