Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125418329
View in Genome Browser
Position
NW_025964887.1:1802-5334 (+)
3532bp
Gene Type
gene
Gene Description (Protein Product)
Solute carrier family 40 member
Organism
Ziziphus jujuba
Also AS AT2G38460

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125420222 cyclic nucleotide-gated ion channel
gene-LOC125424046 Fumarate hydratase
gene-LOC125421088 Solute carrier family 40 member 3

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000041 transition metal ion transport BP
GO:0000325 plant-type vacuole CC
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005381 iron ion transmembrane transporter activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0005774 vacuolar membrane CC
GO:0005886 plasma membrane CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006824 cobalt ion transport BP
GO:0006826 iron ion transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0006879 intracellular iron ion homeostasis BP
GO:0006950 response to stress BP
GO:0007154 cell communication BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009267 cellular response to starvation BP
GO:0009605 response to external stimulus BP
GO:0009705 plant-type vacuole membrane CC
GO:0009987 cellular process BP
GO:0009991 response to extracellular stimulus BP
GO:0010106 cellular response to iron ion starvation BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015087 cobalt ion transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0015675 nickel cation transport BP
GO:0016020 membrane CC
GO:0019725 cellular homeostasis BP
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030001 metal ion transport BP
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0031090 organelle membrane CC
GO:0031667 response to nutrient levels BP
GO:0031668 cellular response to extracellular stimulus BP
GO:0031669 cellular response to nutrient levels BP
GO:0033554 cellular response to stress BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0034755 iron ion transmembrane transport BP
GO:0035444 nickel cation transmembrane transport BP
GO:0042592 homeostatic process BP
GO:0042594 response to starvation BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044437 obsolete vacuolar part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046873 metal ion transmembrane transporter activity MF
GO:0046915 transition metal ion transmembrane transporter activity MF
GO:0046916 obsolete intracellular transition metal ion homeostasis BP
GO:0048878 chemical homeostasis BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051716 cellular response to stimulus BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055068 cobalt ion homeostasis BP
GO:0055072 iron ion homeostasis BP
GO:0055076 obsolete transition metal ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055085 transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071496 cellular response to external stimulus BP
GO:0071944 cell periphery CC
GO:0072511 inorganic cation transmembrane transport BP
GO:0098588 bounding membrane of organelle CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098660 inorganic ion transmembrane transport BP
GO:0098662 inorganic cation transmembrane transport BP
GO:0098771 inorganic ion homeostasis BP
GO:0098805 membrane CC