PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC125418773 View in Genome Browser
Position	NC_063296.1:16679335-16682556 (+) 3221bp
Gene Type	gene
Gene Description (Protein Product)	Folic acid synthesis protein
Organism	Ziziphus jujuba
Also AS	AT4G30000

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125423674 Serine hydroxymethyltransferase

gene-LOC125420105 Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone

gene-LOC125419838 Serine hydroxymethyltransferase

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0003848	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity	MF
GO:0004156	dihydropteroate synthase activity	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006082	organic acid metabolic process	BP
GO:0006575	cellular modified amino acid metabolic process	BP
GO:0006725	cellular aromatic compound metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006760	folic acid-containing compound metabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006979	response to oxidative stress	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009396	folic acid-containing compound biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016740	transferase activity	MF
GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	MF
GO:0016772	transferase activity, transferring phosphorus-containing groups	MF
GO:0016778	diphosphotransferase activity	MF
GO:0018130	heterocycle biosynthetic process	BP
GO:0019438	aromatic compound biosynthetic process	BP
GO:0019752	carboxylic acid metabolic process	BP
GO:0034641	cellular nitrogen compound metabolic process	BP
GO:0042398	cellular modified amino acid biosynthetic process	BP
GO:0042558	pteridine-containing compound metabolic process	BP
GO:0042559	pteridine-containing compound biosynthetic process	BP
GO:0043436	oxoacid metabolic process	BP
GO:0043603	amide metabolic process	BP
GO:0043604	amide biosynthetic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044271	cellular nitrogen compound biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0046483	heterocycle metabolic process	BP
GO:0046653	tetrahydrofolate metabolic process	BP
GO:0046654	tetrahydrofolate biosynthetic process	BP
GO:0050896	response to stimulus	BP
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0071704	organic substance metabolic process	BP
GO:1901360	organic cyclic compound metabolic process	BP
GO:1901362	organic cyclic compound biosynthetic process	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901566	organonitrogen compound biosynthetic process	BP
GO:1901576	organic substance biosynthetic process	BP

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00790	Folate biosynthesis	-