Basic Information
Gene Structure
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Domain
| Database | EntryID | E-Value | Start | end | InterPro ID | Description |
|---|
Regulation&Interaction
Annotation
Orthologous Group
| Orthologous ID | Species Number | All hits in PereRegDB | Hits of this species | Orthologous Detail |
|---|
Expression Profile
| DataSet | Number of Samples expressed(TPM>1) | Mean | Min | Max | Standard deviation(SD) | Coeffcient variation(CV) |
|---|
Pathway
| GO Term | Description | GO Category |
|---|---|---|
| GO:0000381 | regulation of alternative mRNA splicing, via spliceosome | BP |
| GO:0003674 | molecular_function | MF |
| GO:0003676 | nucleic acid binding | MF |
| GO:0003723 | RNA binding | MF |
| GO:0003729 | mRNA binding | MF |
| GO:0005488 | binding | MF |
| GO:0005575 | cellular_component | CC |
| GO:0005622 | intracellular anatomical structure | CC |
| GO:0005623 | obsolete cell | CC |
| GO:0005634 | nucleus | CC |
| GO:0005654 | nucleoplasm | CC |
| GO:0005681 | spliceosomal complex | CC |
| GO:0005737 | cytoplasm | CC |
| GO:0008150 | biological_process | BP |
| GO:0010468 | regulation of gene expression | BP |
| GO:0010941 | regulation of cell death | BP |
| GO:0016604 | nuclear body | CC |
| GO:0016607 | nuclear speck | CC |
| GO:0019219 | regulation of nucleobase-containing compound metabolic process | BP |
| GO:0019222 | regulation of metabolic process | BP |
| GO:0031323 | regulation of cellular metabolic process | BP |
| GO:0031974 | membrane-enclosed lumen | CC |
| GO:0031981 | nuclear lumen | CC |
| GO:0032991 | protein-containing complex | CC |
| GO:0042981 | regulation of apoptotic process | BP |
| GO:0043067 | regulation of programmed cell death | BP |
| GO:0043226 | organelle | CC |
| GO:0043227 | membrane-bounded organelle | CC |
| GO:0043229 | intracellular organelle | CC |
| GO:0043231 | intracellular membrane-bounded organelle | CC |
| GO:0043233 | organelle lumen | CC |
| GO:0043484 | regulation of RNA splicing | BP |
| GO:0044422 | obsolete organelle part | CC |
| GO:0044424 | obsolete intracellular part | CC |
| GO:0044428 | obsolete nuclear part | CC |
| GO:0044446 | obsolete intracellular organelle part | CC |
| GO:0044451 | obsolete nucleoplasm part | CC |
| GO:0044464 | obsolete cell part | CC |
| GO:0048024 | regulation of mRNA splicing, via spliceosome | BP |
| GO:0050684 | regulation of mRNA processing | BP |
| GO:0050789 | regulation of biological process | BP |
| GO:0050794 | regulation of cellular process | BP |
| GO:0051171 | regulation of nitrogen compound metabolic process | BP |
| GO:0051252 | regulation of RNA metabolic process | BP |
| GO:0060255 | regulation of macromolecule metabolic process | BP |
| GO:0065007 | biological regulation | BP |
| GO:0070013 | intracellular organelle lumen | CC |
| GO:0080090 | regulation of primary metabolic process | BP |
| GO:0097159 | organic cyclic compound binding | MF |
| GO:1901363 | heterocyclic compound binding | MF |
| GO:1903311 | regulation of mRNA metabolic process | BP |
| GO:1990904 | ribonucleoprotein complex | CC |
| KEGG Term | Name | Description |
|---|---|---|
| map03040 | Spliceosome | After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified. |