Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125420966
View in Genome Browser
Position
NC_063288.1:7153364-7156441 (+)
3077bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 3 family
Organism
Ziziphus jujuba
Also AS AT3G47000

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125422971 Belongs to the glycosyl hydrolase 9 (cellulase E) family
gene-LOC125422978 Endoglucanase
gene-LOC125423618 Pectate lyase
Regulatory gene
gene-LOC107403286 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
gene-LOC107403503 isoform X1
gene-LOC107403527 transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000272 polysaccharide catabolic process BP
GO:0000323 lytic vacuole CC
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005764 lysosome CC
GO:0005773 vacuole CC
GO:0005886 plasma membrane CC
GO:0005975 carbohydrate metabolic process BP
GO:0005976 polysaccharide metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008422 beta-glucosidase activity MF
GO:0009056 catabolic process BP
GO:0009057 macromolecule catabolic process BP
GO:0009251 glucan catabolic process BP
GO:0015926 glucosidase activity MF
GO:0016020 membrane CC
GO:0016052 carbohydrate catabolic process BP
GO:0016787 hydrolase activity MF
GO:0016798 hydrolase activity, acting on glycosyl bonds MF
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044042 glucan metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:1901575 organic substance catabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map01100 Metabolic pathways -
map00500 Starch and sucrose metabolism -
map00500 Starch and sucrose metabolism -
map00460 Cyanoamino acid metabolism -
map00460 Cyanoamino acid metabolism -