Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125421718
View in Genome Browser
Position
NC_063290.1:3846458-3847935 (+)
1477bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Casparian strip membrane proteins (CASP) family
Organism
Ziziphus jujuba
Also AS AT5G15290

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125423175 xyloglucan galactosyltransferase
gene-LOC125424202 Mechanosensitive ion channel protein
gene-LOC125424095 Mechanosensitive ion channel protein
Regulatory gene
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein
gene-LOC107405758 Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0007043 cell-cell junction assembly BP
GO:0008150 biological_process BP
GO:0009505 plant-type cell wall CC
GO:0009531 secondary cell wall CC
GO:0009987 cellular process BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0022607 cellular component assembly BP
GO:0030312 external encapsulating structure CC
GO:0034329 cell junction assembly BP
GO:0034330 cell junction organization BP
GO:0042545 cell wall modification BP
GO:0042802 identical protein binding MF
GO:0042803 protein homodimerization activity MF
GO:0044085 cellular component biogenesis BP
GO:0044426 obsolete cell wall part CC
GO:0044462 obsolete external encapsulating structure part CC
GO:0044464 obsolete cell part CC
GO:0045216 cell-cell junction organization BP
GO:0045229 external encapsulating structure organization BP
GO:0046983 protein dimerization activity MF
GO:0048037 obsolete cofactor binding MF
GO:0048226 Casparian strip CC
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0071554 cell wall organization or biogenesis BP
GO:0071555 cell wall organization BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC