Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125421982
View in Genome Browser
Position
NC_063290.1:16468157-16475213 (-)
7056bp
Gene Type
gene
Gene Description (Protein Product)
4Fe-4S single cluster domain of Ferredoxin I
Organism
Ziziphus jujuba
Also AS AT2G42750

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125423764 DnaJ molecular chaperone homology domain
gene-LOC125422468 Belongs to the iron ascorbate-dependent oxidoreductase family
gene-LOC125422469 Belongs to the iron ascorbate-dependent oxidoreductase family
Regulatory gene
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein
gene-LOC107405758 Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000002 mitochondrial genome maintenance BP
GO:0000122 negative regulation of transcription by RNA polymerase II BP
GO:0001775 cell activation BP
GO:0001776 leukocyte homeostasis BP
GO:0001932 regulation of protein phosphorylation BP
GO:0001933 negative regulation of protein phosphorylation BP
GO:0001941 postsynaptic membrane organization BP
GO:0001959 regulation of cytokine-mediated signaling pathway BP
GO:0001960 negative regulation of cytokine-mediated signaling pathway BP
GO:0002260 lymphocyte homeostasis BP
GO:0002376 immune system process BP
GO:0002520 immune system development BP
GO:0002521 leukocyte differentiation BP
GO:0002682 regulation of immune system process BP
GO:0002683 negative regulation of immune system process BP
GO:0002684 positive regulation of immune system process BP
GO:0002694 regulation of leukocyte activation BP
GO:0002696 positive regulation of leukocyte activation BP
GO:0003674 molecular_function MF
GO:0005102 signaling receptor binding MF
GO:0005126 cytokine receptor binding MF
GO:0005133 type II interferon receptor binding MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0005739 mitochondrion CC
GO:0005759 mitochondrial matrix CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006259 DNA metabolic process BP
GO:0006260 DNA replication BP
GO:0006261 DNA-templated DNA replication BP
GO:0006264 mitochondrial DNA replication BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006457 protein folding BP
GO:0006469 negative regulation of protein kinase activity BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006915 apoptotic process BP
GO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process BP
GO:0006924 activation-induced cell death of T cells BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006955 immune response BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007264 small GTPase mediated signal transduction BP
GO:0007275 multicellular organism development BP
GO:0007528 neuromuscular junction development BP
GO:0007568 aging BP
GO:0007569 obsolete cell aging BP
GO:0008104 protein localization BP
GO:0008134 transcription factor binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008219 cell death BP
GO:0008284 positive regulation of cell population proliferation BP
GO:0008285 negative regulation of cell population proliferation BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009295 nucleoid CC
GO:0009889 regulation of biosynthetic process BP
GO:0009890 negative regulation of biosynthetic process BP
GO:0009892 negative regulation of metabolic process BP
GO:0009893 positive regulation of metabolic process BP
GO:0009966 regulation of signal transduction BP
GO:0009968 negative regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010466 negative regulation of peptidase activity BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010558 negative regulation of macromolecule biosynthetic process BP
GO:0010563 negative regulation of phosphorus metabolic process BP
GO:0010604 positive regulation of macromolecule metabolic process BP
GO:0010605 negative regulation of macromolecule metabolic process BP
GO:0010629 negative regulation of gene expression BP
GO:0010646 regulation of cell communication BP
GO:0010648 negative regulation of cell communication BP
GO:0010941 regulation of cell death BP
GO:0010942 positive regulation of cell death BP
GO:0010950 positive regulation of endopeptidase activity BP
GO:0010951 negative regulation of endopeptidase activity BP
GO:0010952 positive regulation of peptidase activity BP
GO:0012501 programmed cell death BP
GO:0016020 membrane CC
GO:0016043 cellular component organization BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019220 regulation of phosphate metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019897 extrinsic component of plasma membrane CC
GO:0019898 extrinsic component of membrane CC
GO:0019899 enzyme binding MF
GO:0019900 kinase binding MF
GO:0019901 protein kinase binding MF
GO:0022407 regulation of cell-cell adhesion BP
GO:0022409 positive regulation of cell-cell adhesion BP
GO:0023051 regulation of signaling BP
GO:0023052 signaling BP
GO:0023057 negative regulation of signaling BP
GO:0030097 hemopoiesis BP
GO:0030098 lymphocyte differentiation BP
GO:0030154 cell differentiation BP
GO:0030155 regulation of cell adhesion BP
GO:0030162 regulation of proteolysis BP
GO:0030217 T cell differentiation BP
GO:0030234 enzyme regulator activity MF
GO:0030544 Hsp70 protein binding MF
GO:0030695 GTPase regulator activity MF
GO:0030971 receptor tyrosine kinase binding MF
GO:0031072 heat shock protein binding MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031324 negative regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031327 negative regulation of cellular biosynthetic process BP
GO:0031347 regulation of defense response BP
GO:0031348 negative regulation of defense response BP
GO:0031396 regulation of protein ubiquitination BP
GO:0031398 positive regulation of protein ubiquitination BP
GO:0031399 regulation of protein modification process BP
GO:0031400 negative regulation of protein modification process BP
GO:0031401 positive regulation of protein modification process BP
GO:0031594 neuromuscular junction CC
GO:0031647 regulation of protein stability BP
GO:0031974 membrane-enclosed lumen CC
GO:0032042 mitochondrial DNA metabolic process BP
GO:0032088 negative regulation of NF-kappaB transcription factor activity BP
GO:0032268 regulation of protein metabolic process BP
GO:0032269 negative regulation of protein metabolic process BP
GO:0032270 positive regulation of protein metabolic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032944 regulation of mononuclear cell proliferation BP
GO:0032946 positive regulation of mononuclear cell proliferation BP
GO:0033036 macromolecule localization BP
GO:0033077 T cell differentiation in thymus BP
GO:0033673 negative regulation of kinase activity BP
GO:0034097 response to cytokine BP
GO:0034341 response to type II interferon BP
GO:0034613 protein localization BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0035556 intracellular signal transduction BP
GO:0042102 positive regulation of T cell proliferation BP
GO:0042110 T cell activation BP
GO:0042127 regulation of cell population proliferation BP
GO:0042129 regulation of T cell proliferation BP
GO:0042221 response to chemical BP
GO:0042325 regulation of phosphorylation BP
GO:0042326 negative regulation of phosphorylation BP
GO:0042592 homeostatic process BP
GO:0042645 mitochondrial nucleoid CC
GO:0042981 regulation of apoptotic process BP
GO:0043029 T cell homeostasis BP
GO:0043065 positive regulation of apoptotic process BP
GO:0043066 negative regulation of apoptotic process BP
GO:0043067 regulation of programmed cell death BP
GO:0043068 positive regulation of programmed cell death BP
GO:0043069 negative regulation of programmed cell death BP
GO:0043085 positive regulation of catalytic activity BP
GO:0043086 negative regulation of catalytic activity BP
GO:0043113 receptor clustering BP
GO:0043122 regulation of I-kappaB kinase/NF-kappaB signaling BP
GO:0043124 negative regulation of I-kappaB kinase/NF-kappaB signaling BP
GO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043280 positive regulation of cysteine-type endopeptidase activity involved in apoptotic process BP
GO:0043281 regulation of cysteine-type endopeptidase activity involved in apoptotic process BP
GO:0043433 negative regulation of DNA-binding transcription factor activity BP
GO:0043549 regulation of kinase activity BP
GO:0044092 negative regulation of molecular function BP
GO:0044093 positive regulation of molecular function BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044429 obsolete mitochondrial part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044456 obsolete synapse part CC
GO:0044459 obsolete plasma membrane part CC
GO:0044464 obsolete cell part CC
GO:0045087 innate immune response BP
GO:0045088 regulation of innate immune response BP
GO:0045202 synapse CC
GO:0045211 postsynaptic membrane CC
GO:0045321 leukocyte activation BP
GO:0045785 positive regulation of cell adhesion BP
GO:0045824 negative regulation of innate immune response BP
GO:0045859 regulation of protein kinase activity BP
GO:0045861 negative regulation of proteolysis BP
GO:0045862 positive regulation of proteolysis BP
GO:0045892 negative regulation of DNA-templated transcription BP
GO:0045934 negative regulation of nucleobase-containing compound metabolic process BP
GO:0045936 negative regulation of phosphate metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0046649 lymphocyte activation BP
GO:0048513 animal organ development BP
GO:0048518 positive regulation of biological process BP
GO:0048519 negative regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048523 negative regulation of cellular process BP
GO:0048534 hematopoietic or lymphoid organ development BP
GO:0048583 regulation of response to stimulus BP
GO:0048585 negative regulation of response to stimulus BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0048872 homeostasis of number of cells BP
GO:0050670 regulation of lymphocyte proliferation BP
GO:0050671 positive regulation of lymphocyte proliferation BP
GO:0050776 regulation of immune response BP
GO:0050777 negative regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050790 regulation of catalytic activity BP
GO:0050794 regulation of cellular process BP
GO:0050808 synapse organization BP
GO:0050821 protein stabilization BP
GO:0050863 regulation of T cell activation BP
GO:0050865 regulation of cell activation BP
GO:0050867 positive regulation of cell activation BP
GO:0050870 positive regulation of T cell activation BP
GO:0050896 response to stimulus BP
GO:0051059 NF-kappaB binding MF
GO:0051082 unfolded protein binding MF
GO:0051090 regulation of DNA-binding transcription factor activity BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051172 negative regulation of nitrogen compound metabolic process BP
GO:0051173 positive regulation of nitrogen compound metabolic process BP
GO:0051174 regulation of phosphorus metabolic process BP
GO:0051179 localization BP
GO:0051246 regulation of protein metabolic process BP
GO:0051247 positive regulation of protein metabolic process BP
GO:0051248 negative regulation of protein metabolic process BP
GO:0051249 regulation of lymphocyte activation BP
GO:0051251 positive regulation of lymphocyte activation BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051253 negative regulation of RNA metabolic process BP
GO:0051336 regulation of hydrolase activity BP
GO:0051338 regulation of transferase activity BP
GO:0051345 positive regulation of hydrolase activity BP
GO:0051346 negative regulation of hydrolase activity BP
GO:0051348 negative regulation of transferase activity BP
GO:0051641 cellular localization BP
GO:0051668 localization within membrane BP
GO:0051716 cellular response to stimulus BP
GO:0052547 regulation of peptidase activity BP
GO:0052548 regulation of endopeptidase activity BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0060330 regulation of response to type II interferon BP
GO:0060331 negative regulation of response to type II interferon BP
GO:0060334 regulation of type II interferon-mediated signaling pathway BP
GO:0060336 negative regulation of type II interferon-mediated signaling pathway BP
GO:0060548 negative regulation of cell death BP
GO:0060589 nucleoside-triphosphatase regulator activity MF
GO:0060759 regulation of response to cytokine stimulus BP
GO:0060761 negative regulation of response to cytokine stimulus BP
GO:0061024 membrane organization BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0065009 regulation of molecular function BP
GO:0070013 intracellular organelle lumen CC
GO:0070227 lymphocyte apoptotic process BP
GO:0070231 T cell apoptotic process BP
GO:0070663 regulation of leukocyte proliferation BP
GO:0070665 positive regulation of leukocyte proliferation BP
GO:0070727 cellular macromolecule localization BP
GO:0071340 skeletal muscle acetylcholine-gated channel clustering BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071887 leukocyte apoptotic process BP
GO:0071944 cell periphery CC
GO:0072657 protein localization to membrane BP
GO:0080090 regulation of primary metabolic process BP
GO:0080134 regulation of response to stress BP
GO:0090304 nucleic acid metabolic process BP
GO:0097060 synaptic membrane CC
GO:0098590 plasma membrane region CC
GO:0098772 molecular function regulator activity MF
GO:0098794 postsynapse CC
GO:0099173 postsynapse organization BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1902531 regulation of intracellular signal transduction BP
GO:1902532 negative regulation of intracellular signal transduction BP
GO:1902679 negative regulation of RNA biosynthetic process BP
GO:1903037 regulation of leukocyte cell-cell adhesion BP
GO:1903039 positive regulation of leukocyte cell-cell adhesion BP
GO:1903320 regulation of protein modification by small protein conjugation or removal BP
GO:1903322 positive regulation of protein modification by small protein conjugation or removal BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1903507 negative regulation of nucleic acid-templated transcription BP
GO:1990782 protein tyrosine kinase binding MF
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000113 negative regulation of cellular macromolecule biosynthetic process BP
GO:2000116 regulation of cysteine-type endopeptidase activity BP
GO:2000117 negative regulation of cysteine-type endopeptidase activity BP
GO:2001056 positive regulation of cysteine-type endopeptidase activity BP
GO:2001141 regulation of RNA biosynthetic process BP