Basic Information
Gene ID
gene-LOC125422040
Position
NC_063290.1:21346612-21348708 (+)
2096bp
Gene Type
gene
Gene Description (Protein Product)
Cytokinin dehydrogenase
Organism
Also AS AT4G29740

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125423060 Belongs to the iron ascorbate-dependent oxidoreductase family
Regulatory gene
gene-LOC107403266 AP2-like ethylene-responsive transcription factor
gene-LOC107403899 dof zinc finger protein
gene-LOC107404240 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005615 extracellular space CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005788 endoplasmic reticulum lumen CC
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008131 primary amine oxidase activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009056 catabolic process BP
GO:0009308 amine metabolic process BP
GO:0009690 cytokinin metabolic process BP
GO:0009823 cytokinin catabolic process BP
GO:0009987 cellular process BP
GO:0010817 regulation of hormone levels BP
GO:0012505 endomembrane system CC
GO:0016491 oxidoreductase activity MF
GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors MF
GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor MF
GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors MF
GO:0019139 cytokinin dehydrogenase activity MF
GO:0031974 membrane-enclosed lumen CC
GO:0034754 hormone metabolic process BP
GO:0042445 hormone metabolic process BP
GO:0042447 hormone catabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044237 cellular metabolic process BP
GO:0044421 obsolete extracellular region part CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044432 obsolete endoplasmic reticulum part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:1901564 organonitrogen compound metabolic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map00908 Zeatin biosynthesis Zeatin is a member of the cytokinin family, a class of phytohormones involved in various processes of growth and development in plants. Most abundant cytokinins are adenine-type, where the N6 position of adenine is substituted with an isoprenoid, such as in zeatin, or an aromatic side chain, such as in kinetin. Zeatin can be synthesized in two different pathways: the tRNA pathway and the AMP pathway. In the tRNA pathway zeatin is a recycled product of isopentenylated tRNAs. In the AMP pathway zeatin is synthesized from an isopentenyl donor, dimethylallyl diphosphate (DMAPP), and AMP, ADP, or ATP by isopentenyltransferases. After synthesis cytokinins can be glucosylated.