PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC125422064 View in Genome Browser
Position	NC_063290.1:24371611-24371967 (+) 356bp
Gene Type	gene
Gene Description (Protein Product)	ATP synthase subunit alpha
Organism	Ziziphus jujuba
Also AS	ATCG00120

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-LOC125423826 ATP synthase subunit beta

gene-LOC125422904 ATP synthase delta chain

gene-LOC125423896 Photosystem II (PSII) is a light-driven water plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O; generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons; and an electron transfer chain that converts photonic excitation into a charge separation. The D1 D2 (PsbA PsbA) reaction center heterodimer binds P680; the primary electron donor of PSII as well as several subsequent electron acceptors

Regulatory gene

gene-LOC107403899 dof zinc finger protein

gene-LOC107404240 Dof zinc finger protein

gene-LOC107404450 B3 DNA binding domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

KEGG Term	Name	Description
map01100	Metabolic pathways	-
map00195	Photosynthesis	Photosynthesis in green plants and specialized bacteria is the process of utilizing light energy to synthesize organic compounds from carbon dioxide and water. It consists of the light dependent part (light reaction) and the light independent part (dark reaction, carbon fixation). The light reaction takes place in thylakoid, a membrane-bound compartment inside chloroplasts and cyanobacteria. The light energy is used by photosystems I and II to generate proton motive force and reducing power (NADPH or NADH). The proton motive force is used by ATP synthase to generate ATP, essentially in the same way as the mitochondrial respiratory chain. The supplies of ATP and NAD(P)H are then used to fix carbon dioxide.
map00190	Oxidative phosphorylation	-