Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125422277
View in Genome Browser
Position
NC_063291.1:7842688-7846917 (-)
4229bp
Gene Type
gene
Gene Description (Protein Product)
Catalytic histone acetyltransferase subunit of the RNA polymerase II elongator complex; which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation
Organism
Ziziphus jujuba
Also AS AT5G50320

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125423073 Threonylcarbamoyladenosine tRNA
gene-LOC125424300 elongation of fatty acids protein
gene-LOC125422296 Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria; which is required for maturation of both mitochondrial and cytoplasmic 2Fe-2S and 4Fe-4S proteins
Regulatory gene
gene-LOC107403503 isoform X1
gene-LOC107403626 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains
gene-LOC107403899 dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000228 nuclear chromosome CC
GO:0000785 chromatin CC
GO:0000790 chromatin CC
GO:0000791 euchromatin CC
GO:0002097 tRNA wobble base modification BP
GO:0002098 tRNA wobble uridine modification BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004402 histone acetyltransferase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0005719 euchromatin CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006325 chromatin organization BP
GO:0006355 regulation of DNA-templated transcription BP
GO:0006357 regulation of transcription by RNA polymerase II BP
GO:0006396 RNA processing BP
GO:0006399 tRNA metabolic process BP
GO:0006400 tRNA modification BP
GO:0006464 protein modification process BP
GO:0006473 protein acetylation BP
GO:0006475 internal protein amino acid acetylation BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006996 organelle organization BP
GO:0007275 multicellular organism development BP
GO:0007389 pattern specification process BP
GO:0008033 tRNA processing BP
GO:0008080 N-acetyltransferase activity MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008283 cell population proliferation BP
GO:0009292 horizontal gene transfer BP
GO:0009294 DNA-mediated transformation BP
GO:0009451 RNA modification BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009798 axis specification BP
GO:0009889 regulation of biosynthetic process BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010467 gene expression BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0010646 regulation of cell communication BP
GO:0010928 regulation of auxin mediated signaling pathway BP
GO:0016043 cellular component organization BP
GO:0016070 RNA metabolic process BP
GO:0016407 acetyltransferase activity MF
GO:0016410 N-acyltransferase activity MF
GO:0016569 obsolete covalent chromatin modification BP
GO:0016570 histone modification BP
GO:0016573 histone acetylation BP
GO:0016740 transferase activity MF
GO:0016746 acyltransferase activity MF
GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups MF
GO:0018193 peptidyl-amino acid modification BP
GO:0018205 peptidyl-lysine modification BP
GO:0018393 internal peptidyl-lysine acetylation BP
GO:0018394 peptidyl-lysine acetylation BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0019538 protein metabolic process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0023051 regulation of signaling BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032991 protein-containing complex CC
GO:0033588 elongator holoenzyme complex CC
GO:0034212 peptide N-acetyltransferase activity MF
GO:0034470 ncRNA processing BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034660 ncRNA metabolic process BP
GO:0035265 organ growth BP
GO:0036211 protein modification process BP
GO:0040007 growth BP
GO:0043170 macromolecule metabolic process BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0043412 macromolecule modification BP
GO:0043543 protein acylation BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0044764 obsolete multi-organism cellular process BP
GO:0046483 heterocycle metabolic process BP
GO:0048583 regulation of response to stimulus BP
GO:0048589 developmental growth BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0051276 chromosome organization BP
GO:0051704 obsolete multi-organism process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0061733 peptide-lysine-N-acetyltransferase activity MF
GO:0065001 specification of axis polarity BP
GO:0065007 biological regulation BP
GO:0070013 intracellular organelle lumen CC
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0080090 regulation of primary metabolic process BP
GO:0090304 nucleic acid metabolic process BP
GO:0090708 specification of plant organ axis polarity BP
GO:0099402 plant organ development BP
GO:1900618 regulation of shoot system morphogenesis BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901371 regulation of leaf morphogenesis BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905392 plant organ morphogenesis BP
GO:1905421 regulation of plant organ morphogenesis BP
GO:1905428 regulation of plant organ formation BP
GO:2000024 regulation of leaf development BP
GO:2000025 regulation of leaf formation BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2001141 regulation of RNA biosynthetic process BP