Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-LOC125422504
View in Genome Browser
Position
NC_063291.1:26404867-26406291 (+)
1424bp
Gene Type
gene
Gene Description (Protein Product)
Helix-loop-helix DNA-binding domain
Organism
Ziziphus jujuba
Also AS AT3G47710

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-LOC125422541 MADS-box protein
gene-LOC125424100 Belongs to the class I-like SAM-binding methyltransferase superfamily. Erg6 SMT family
gene-LOC125424167 auxin-induced protein
Regulatory gene
gene-LOC107405089 Protein BASIC PENTACYSTEINE2-like
gene-LOC107420393 Protein BASIC PENTACYSTEINE6-like
gene-LOC107426555 Protein BASIC PENTACYSTEINE4-like
Target gene
gene-LOC107403322 Cytochrome p450
gene-LOC107404084 Belongs to the glycosyl hydrolase 1 family
gene-LOC107404101 ATP synthase g subunit family protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003700 DNA-binding transcription factor activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005737 cytoplasm CC
GO:0006355 regulation of DNA-templated transcription BP
GO:0007275 multicellular organism development BP
GO:0008150 biological_process BP
GO:0009314 response to radiation BP
GO:0009416 response to light stimulus BP
GO:0009628 response to abiotic stimulus BP
GO:0009639 response to red or far red light BP
GO:0009640 photomorphogenesis BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009790 embryo development BP
GO:0009791 post-embryonic development BP
GO:0009889 regulation of biosynthetic process BP
GO:0010015 root morphogenesis BP
GO:0010086 embryonic root morphogenesis BP
GO:0010468 regulation of gene expression BP
GO:0010556 regulation of macromolecule biosynthetic process BP
GO:0019219 regulation of nucleobase-containing compound metabolic process BP
GO:0019222 regulation of metabolic process BP
GO:0022622 root system development BP
GO:0031323 regulation of cellular metabolic process BP
GO:0031326 regulation of cellular biosynthetic process BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0040008 regulation of growth BP
GO:0040034 regulation of development, heterochronic BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0048364 root development BP
GO:0048506 regulation of timing of meristematic phase transition BP
GO:0048509 regulation of meristem development BP
GO:0048510 regulation of timing of transition from vegetative to reproductive phase BP
GO:0048580 regulation of post-embryonic development BP
GO:0048598 embryonic morphogenesis BP
GO:0048638 regulation of developmental growth BP
GO:0048731 system development BP
GO:0048856 anatomical structure development BP
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050896 response to stimulus BP
GO:0051171 regulation of nitrogen compound metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051252 regulation of RNA metabolic process BP
GO:0060255 regulation of macromolecule metabolic process BP
GO:0065007 biological regulation BP
GO:0080050 regulation of seed development BP
GO:0080090 regulation of primary metabolic process BP
GO:0080113 regulation of seed growth BP
GO:0099402 plant organ development BP
GO:0140110 transcription regulator activity MF
GO:1903506 regulation of nucleic acid-templated transcription BP
GO:1905392 plant organ morphogenesis BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000112 regulation of cellular macromolecule biosynthetic process BP
GO:2000241 regulation of reproductive process BP
GO:2001141 regulation of RNA biosynthetic process BP