PPGR - Gene Detail

Basic Information

Gene ID	gene-LOC125423703 View in Genome Browser
Position	NC_063294.1:4500724-4505174 (+) 4450bp
Gene Type	gene
Gene Description (Protein Product)	D-arabinono-1;4-lactone oxidase
Organism	Ziziphus jujuba
Also AS	AT2G46760

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Regulatory gene

gene-LOC107403286 SANT SWI3; ADA2; N-CoR and TFIIIB'' DNA-binding domains

gene-LOC107403364 Transcription factor

gene-LOC107403527 transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000166	nucleotide binding	MF
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0005488	binding	MF
GO:0005575	cellular_component	CC
GO:0005618	cell wall	CC
GO:0005623	obsolete cell	CC
GO:0005975	carbohydrate metabolic process	BP
GO:0005996	monosaccharide metabolic process	BP
GO:0006082	organic acid metabolic process	BP
GO:0006732	obsolete coenzyme metabolic process	BP
GO:0006766	vitamin metabolic process	BP
GO:0006767	water-soluble vitamin metabolic process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009058	biosynthetic process	BP
GO:0009108	obsolete coenzyme biosynthetic process	BP
GO:0009110	vitamin biosynthetic process	BP
GO:0009987	cellular process	BP
GO:0016051	carbohydrate biosynthetic process	BP
GO:0016053	organic acid biosynthetic process	BP
GO:0016491	oxidoreductase activity	MF
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	MF
GO:0016899	oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	MF
GO:0019752	carboxylic acid metabolic process	BP
GO:0019852	L-ascorbic acid metabolic process	BP
GO:0019853	L-ascorbic acid biosynthetic process	BP
GO:0030312	external encapsulating structure	CC
GO:0036094	small molecule binding	MF
GO:0042364	water-soluble vitamin biosynthetic process	BP
GO:0043167	ion binding	MF
GO:0043168	anion binding	MF
GO:0043436	oxoacid metabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044249	cellular biosynthetic process	BP
GO:0044281	small molecule metabolic process	BP
GO:0044283	small molecule biosynthetic process	BP
GO:0044464	obsolete cell part	CC
GO:0046364	monosaccharide biosynthetic process	BP
GO:0046394	carboxylic acid biosynthetic process	BP
GO:0048037	obsolete cofactor binding	MF
GO:0050105	L-gulonolactone oxidase activity	MF
GO:0050660	flavin adenine dinucleotide binding	MF
GO:0050662	obsolete coenzyme binding	MF
GO:0051186	obsolete cofactor metabolic process	BP
GO:0051188	obsolete cofactor biosynthetic process	BP
GO:0055114	obsolete oxidation-reduction process	BP
GO:0071704	organic substance metabolic process	BP
GO:0071944	cell periphery	CC
GO:0097159	organic cyclic compound binding	MF
GO:1901265	nucleoside phosphate binding	MF
GO:1901363	heterocyclic compound binding	MF
GO:1901576	organic substance biosynthetic process	BP