Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_A17G052656
View in Genome Browser
Position
chrA17:16454018-16460212 (-)
6194bp
Gene Type
gene
Gene Description (Protein Product)
cysteine protease
Organism
Populus alba x Populus glandulosa
Also AS Potri.017G000500AT2G44140Potri.017G000500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G02G024168 Autophagy-related protein
Pop_G02G016008 Belongs to the ATG8 family
Pop_G14G088945 Belongs to the ATG8 family
Regulatory gene
Pop_A01G004199 GAGA binding protein-like family
Pop_A02G005181 Protein BASIC PENTACYSTEINE6-like
Pop_A04G028302 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0000045 autophagosome assembly BP
GO:0000422 autophagy of mitochondrion BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004175 endopeptidase activity MF
GO:0004197 cysteine-type endopeptidase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0006464 protein modification process BP
GO:0006497 protein lipidation BP
GO:0006501 C-terminal protein lipidation BP
GO:0006508 proteolysis BP
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006914 autophagy BP
GO:0006996 organelle organization BP
GO:0007005 mitochondrion organization BP
GO:0007033 vacuole organization BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0009056 catabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009987 cellular process BP
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016043 cellular component organization BP
GO:0016236 macroautophagy BP
GO:0016787 hydrolase activity MF
GO:0018410 C-terminal protein amino acid modification BP
GO:0019538 protein metabolic process BP
GO:0022411 cellular component disassembly BP
GO:0022607 cellular component assembly BP
GO:0033036 macromolecule localization BP
GO:0034613 protein localization BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0036211 protein modification process BP
GO:0042157 lipoprotein metabolic process BP
GO:0042158 lipoprotein biosynthetic process BP
GO:0042886 amide transport BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043687 post-translational protein modification BP
GO:0044085 cellular component biogenesis BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044248 cellular catabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0044804 autophagy of nucleus BP
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0051697 protein delipidation BP
GO:0061726 mitochondrion disassembly BP
GO:0061919 process utilizing autophagic mechanism BP
GO:0070011 peptidase activity MF
GO:0070727 cellular macromolecule localization BP
GO:0070925 organelle assembly BP
GO:0071702 organic substance transport BP
GO:0071704 organic substance metabolic process BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0072657 protein localization to membrane BP
GO:0090150 establishment of protein localization to membrane BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1903008 organelle disassembly BP
GO:1905037 autophagosome organization BP