Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Basic Information
Gene ID
Pop_G04G066494
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Position
chrG04:14451206-14453517 (+)
2311bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the glycosyl hydrolase 28 family
Organism
Populus alba x Populus glandulosa
Also AS Potri.004G073900AT3G48950Potri.004G073900.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G11G070390 Ubiquitin exists either covalently attached to another protein, or free (unanchored). When covalently bound, it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin), a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains, when attached to a target protein, have different functions depending on the Lys residue of the ubiquitin that is linked Lys-11-linked is involved in ERAD (endoplasmic reticulum-associated degradation) and in cell-cycle regulation
Pop_G05G032902 cellular macromolecule catabolic process
Pop_G08G058283 Pectinesterase
Regulatory gene
Pop_A01G004199 GAGA binding protein-like family
Pop_A02G005181 Protein BASIC PENTACYSTEINE6-like
Pop_A04G028302 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)