PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Basic Information

Gene ID	Pop_G06G075925 View in Genome Browser
Position	chrG06:20609317-20612793 (+) 3476bp
Gene Type	gene
Gene Description (Protein Product)	Zinc finger AN1 and C2H2 domain-containing stress-associated protein
Organism	Populus alba x Populus glandulosa
Also AS	Potri.006G052200AT2G41835Potri.006G052200.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G17G033313 Anaphase-promoting complex subunit Pop_G12G068244 Anaphase-promoting complex subunit Pop_G10G027049 Cysteine-rich receptor-like protein kinase
Regulatory gene	Pop_A01G004199 GAGA binding protein-like family Pop_A02G005181 Protein BASIC PENTACYSTEINE6-like Pop_A04G028302 Protein BASIC PENTACYSTEINE4-like
Target gene	Pop_A01G000040 Reverse transcriptase (RNA-dependent DNA polymerase) Pop_A01G000048 Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome Pop_A01G002195

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

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