Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G08G082225
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Position
chrG08:6338341-6346246 (+)
7905bp
Gene Type
gene
Gene Description (Protein Product)
prolyl 4-hydroxylase
Organism
Populus alba x Populus glandulosa
Also AS Potri.008G197700AT5G18900Potri.008G197700.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G17G021067 Converts proline to delta-1-pyrroline-5-carboxylate
Pop_G19G007609 4-coumarate-coa ligase
Pop_G17G025739 4-coumarate--CoA ligase-like
Regulatory gene
Pop_A01G004199 GAGA binding protein-like family
Pop_A02G005181 Protein BASIC PENTACYSTEINE6-like
Pop_A04G028302 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004656 procollagen-proline 4-dioxygenase activity MF
GO:0006082 organic acid metabolic process BP
GO:0006464 protein modification process BP
GO:0006520 amino acid metabolic process BP
GO:0006575 cellular modified amino acid metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009987 cellular process BP
GO:0016491 oxidoreductase activity MF
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen MF
GO:0016706 2-oxoglutarate-dependent dioxygenase activity MF
GO:0018126 protein hydroxylation BP
GO:0018193 peptidyl-amino acid modification BP
GO:0018208 peptidyl-proline modification BP
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline BP
GO:0019471 4-hydroxyproline metabolic process BP
GO:0019511 peptidyl-proline hydroxylation BP
GO:0019538 protein metabolic process BP
GO:0019752 carboxylic acid metabolic process BP
GO:0019798 procollagen-proline dioxygenase activity MF
GO:0031543 peptidyl-proline dioxygenase activity MF
GO:0031545 peptidyl-proline 4-dioxygenase activity MF
GO:0036211 protein modification process BP
GO:0043170 macromolecule metabolic process BP
GO:0043412 macromolecule modification BP
GO:0043436 oxoacid metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0051213 dioxygenase activity MF
GO:0055114 obsolete oxidation-reduction process BP
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP
GO:1901605 alpha-amino acid metabolic process BP
KEGG Term Name Description
map01100 Metabolic pathways -
map00330 Arginine and proline metabolism -