PPGR - Gene Detail

Basic Information

Gene ID	Pop_G12G050738 View in Genome Browser
Position	chrG12:9712395-9715799 (-) 3404bp
Gene Type	gene
Gene Description (Protein Product)	N-alpha-acetyltransferase
Organism	Populus alba x Populus glandulosa
Also AS	Potri.012G041400AT1G18335Potri.012G041400.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Pop_G13G072739 Phagocyte signaling-impaired protein

Pop_G18G080112 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling

Pop_G18G080107 Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling

Regulatory gene

Pop_A01G002215 NAC domain-containing protein

Pop_A01G004084 NAC domain-containing protein

Pop_A01G004498 Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0003824	catalytic activity	MF
GO:0004402	histone acetyltransferase activity	MF
GO:0004596	peptide alpha-N-acetyltransferase activity	MF
GO:0006325	chromatin organization	BP
GO:0006464	protein modification process	BP
GO:0006473	protein acetylation	BP
GO:0006474	N-terminal protein amino acid acetylation	BP
GO:0006475	internal protein amino acid acetylation	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006996	organelle organization	BP
GO:0008080	N-acetyltransferase activity	MF
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009987	cellular process	BP
GO:0010467	gene expression	BP
GO:0010485	histone H4 acetyltransferase activity	MF
GO:0016043	cellular component organization	BP
GO:0016407	acetyltransferase activity	MF
GO:0016410	N-acyltransferase activity	MF
GO:0016569	obsolete covalent chromatin modification	BP
GO:0016570	histone modification	BP
GO:0016573	histone acetylation	BP
GO:0016740	transferase activity	MF
GO:0016746	acyltransferase activity	MF
GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	MF
GO:0018193	peptidyl-amino acid modification	BP
GO:0018205	peptidyl-lysine modification	BP
GO:0018393	internal peptidyl-lysine acetylation	BP
GO:0018394	peptidyl-lysine acetylation	BP
GO:0019538	protein metabolic process	BP
GO:0031365	N-terminal protein amino acid modification	BP
GO:0034212	peptide N-acetyltransferase activity	MF
GO:0036211	protein modification process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043412	macromolecule modification	BP
GO:0043543	protein acylation	BP
GO:0043967	histone H4 acetylation	BP
GO:0043968	histone H2A acetylation	BP
GO:0043998	histone H2A acetyltransferase activity	MF
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0051276	chromosome organization	BP
GO:0051604	protein maturation	BP
GO:0061733	peptide-lysine-N-acetyltransferase activity	MF
GO:0071704	organic substance metabolic process	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1990189	peptide-serine-alpha-N-acetyltransferase activity	MF