PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G12G084608 View in Genome Browser
Position	chrG12:386956-388504 (-) 1548bp
Gene Type	gene
Gene Description (Protein Product)	60S ribosomal Protein
Organism	Populus alba x Populus glandulosa
Also AS	Potri.012G139400AT2G36620Potri.012G139400.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G16G025214 Belongs to the eukaryotic ribosomal protein eL27 family Pop_G18G086115 Belongs to the universal ribosomal protein uL11 family Pop_UnG069715 Belongs to the eukaryotic ribosomal protein P1 P2 family
Regulatory gene	Pop_A01G002215 NAC domain-containing protein Pop_A01G003796 isoform X1 Pop_A01G003952 transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC

KEGG Term	Name	Description
map03010	Ribosome	-