Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G16G025214
View in Genome Browser
Position
chrG16:12664300-12665304 (+)
1004bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the eukaryotic ribosomal protein eL27 family
Organism
Populus alba x Populus glandulosa
Also AS Potri.016G019000AT4G15000Potri.016G019000.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G16G060775 Belongs to the universal ribosomal protein uS12 family
Pop_G17G021208 60S ribosomal Protein
Pop_G17G021205 60S ribosomal Protein
Regulatory gene
Pop_A01G004199 GAGA binding protein-like family
Pop_A02G005181 Protein BASIC PENTACYSTEINE6-like
Pop_A04G028302 Protein BASIC PENTACYSTEINE4-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003735 structural constituent of ribosome MF
GO:0005198 structural molecule activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005840 ribosome CC
GO:0005844 polysome CC
GO:0015934 large ribosomal subunit CC
GO:0016020 membrane CC
GO:0022625 cytosolic large ribosomal subunit CC
GO:0022626 cytosolic ribosome CC
GO:0032991 protein-containing complex CC
GO:0042788 polysomal ribosome CC
GO:0043226 organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0044391 ribosomal subunit CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044445 obsolete cytosolic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC
GO:1990904 ribonucleoprotein complex CC
KEGG Term Name Description
map03010 Ribosome -