PPGR - Gene Detail

Basic Information

Gene Structure

Domain

Regulation&
Interaction

Annotation

Orthologus Group

Expresssion

Pathway

Basic Information

Gene ID	Pop_G16G016338 View in Genome Browser
Position	chrG16:11090483-11092735 (+) 2252bp
Gene Type	gene
Gene Description (Protein Product)	Regulatory protein
Organism	Populus alba x Populus glandulosa
Also AS	Potri.016G040500AT2G41370Potri.016G040500.v4.1

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)	Pop_G16G025649 TGACG-sequence-specific DNA-binding protein Pop_G19G009691 Indole-3-acetic acid-amido synthetase Pop_G16G016338 Regulatory protein
Regulatory gene	Pop_A01G004199 GAGA binding protein-like family Pop_A01G056931 Dof zinc finger protein Pop_A01G059879 Dof zinc finger protein

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0000003	reproduction	BP
GO:0000151	ubiquitin ligase complex	CC
GO:0001101	response to acid chemical	BP
GO:0002218	activation of innate immune response	BP
GO:0002252	immune effector process	BP
GO:0002253	activation of immune response	BP
GO:0002376	immune system process	BP
GO:0002682	regulation of immune system process	BP
GO:0002684	positive regulation of immune system process	BP
GO:0003002	regionalization	BP
GO:0003006	developmental process involved in reproduction	BP
GO:0003674	molecular_function	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005634	nucleus	CC
GO:0005737	cytoplasm	CC
GO:0006508	proteolysis	BP
GO:0006511	ubiquitin-dependent protein catabolic process	BP
GO:0006807	nitrogen compound metabolic process	BP
GO:0006950	response to stress	BP
GO:0006952	defense response	BP
GO:0006955	immune response	BP
GO:0007154	cell communication	BP
GO:0007165	signal transduction	BP
GO:0007275	multicellular organism development	BP
GO:0007389	pattern specification process	BP
GO:0008150	biological_process	BP
GO:0008152	metabolic process	BP
GO:0009056	catabolic process	BP
GO:0009057	macromolecule catabolic process	BP
GO:0009605	response to external stimulus	BP
GO:0009607	response to biotic stimulus	BP
GO:0009617	response to bacterium	BP
GO:0009653	anatomical structure morphogenesis	BP
GO:0009682	induced systemic resistance	BP
GO:0009719	response to endogenous stimulus	BP
GO:0009725	response to hormone	BP
GO:0009753	response to jasmonic acid	BP
GO:0009755	hormone-mediated signaling pathway	BP
GO:0009791	post-embryonic development	BP
GO:0009798	axis specification	BP
GO:0009838	abscission	BP
GO:0009864	induced systemic resistance, jasmonic acid mediated signaling pathway	BP
GO:0009867	jasmonic acid mediated signaling pathway	BP
GO:0009888	tissue development	BP
GO:0009908	flower development	BP
GO:0009943	adaxial/abaxial axis specification	BP
GO:0009944	polarity specification of adaxial/abaxial axis	BP
GO:0009954	proximal/distal pattern formation	BP
GO:0009955	adaxial/abaxial pattern specification	BP
GO:0009965	leaf morphogenesis	BP
GO:0009987	cellular process	BP
GO:0010016	shoot system morphogenesis	BP
GO:0010022	meristem determinacy	BP
GO:0010033	response to organic substance	BP
GO:0010073	meristem maintenance	BP
GO:0010227	floral organ abscission	BP
GO:0010254	nectary development	BP
GO:0010432	bract development	BP
GO:0010433	bract morphogenesis	BP
GO:0010434	bract formation	BP
GO:0010498	proteasomal protein catabolic process	BP
GO:0010582	floral meristem determinacy	BP
GO:0019005	SCF ubiquitin ligase complex	CC
GO:0019222	regulation of metabolic process	BP
GO:0019538	protein metabolic process	BP
GO:0019899	enzyme binding	MF
GO:0019941	modification-dependent protein catabolic process	BP
GO:0022414	reproductive process	BP
GO:0023052	signaling	BP
GO:0030162	regulation of proteolysis	BP
GO:0030163	protein catabolic process	BP
GO:0031347	regulation of defense response	BP
GO:0031349	positive regulation of defense response	BP
GO:0031461	cullin-RING ubiquitin ligase complex	CC
GO:0031625	ubiquitin protein ligase binding	MF
GO:0032501	multicellular organismal process	BP
GO:0032502	developmental process	BP
GO:0032870	cellular response to hormone stimulus	BP
GO:0032991	protein-containing complex	CC
GO:0042221	response to chemical	BP
GO:0042742	defense response to bacterium	BP
GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	BP
GO:0043170	macromolecule metabolic process	BP
GO:0043207	response to external biotic stimulus	BP
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0043632	modification-dependent macromolecule catabolic process	BP
GO:0044237	cellular metabolic process	BP
GO:0044238	primary metabolic process	BP
GO:0044248	cellular catabolic process	BP
GO:0044257	protein catabolic process	BP
GO:0044260	cellular macromolecule metabolic process	BP
GO:0044265	cellular macromolecule catabolic process	BP
GO:0044267	protein metabolic process	BP
GO:0044389	ubiquitin-like protein ligase binding	MF
GO:0044424	obsolete intracellular part	CC
GO:0044464	obsolete cell part	CC
GO:0045087	innate immune response	BP
GO:0045088	regulation of innate immune response	BP
GO:0045089	positive regulation of innate immune response	BP
GO:0048366	leaf development	BP
GO:0048367	shoot system development	BP
GO:0048437	floral organ development	BP
GO:0048439	flower morphogenesis	BP
GO:0048507	meristem development	BP
GO:0048518	positive regulation of biological process	BP
GO:0048583	regulation of response to stimulus	BP
GO:0048584	positive regulation of response to stimulus	BP
GO:0048608	reproductive structure development	BP
GO:0048646	anatomical structure formation involved in morphogenesis	BP
GO:0048731	system development	BP
GO:0048827	phyllome development	BP
GO:0048856	anatomical structure development	BP
GO:0050776	regulation of immune response	BP
GO:0050778	positive regulation of immune response	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0050896	response to stimulus	BP
GO:0051171	regulation of nitrogen compound metabolic process	BP
GO:0051246	regulation of protein metabolic process	BP
GO:0051603	proteolysis involved in protein catabolic process	BP
GO:0051704	obsolete multi-organism process	BP
GO:0051707	response to other organism	BP
GO:0051716	cellular response to stimulus	BP
GO:0060255	regulation of macromolecule metabolic process	BP
GO:0061458	reproductive system development	BP
GO:0065001	specification of axis polarity	BP
GO:0065007	biological regulation	BP
GO:0070887	cellular response to chemical stimulus	BP
GO:0071229	cellular response to acid chemical	BP
GO:0071310	cellular response to organic substance	BP
GO:0071395	cellular response to jasmonic acid stimulus	BP
GO:0071495	cellular response to endogenous stimulus	BP
GO:0071704	organic substance metabolic process	BP
GO:0080090	regulation of primary metabolic process	BP
GO:0080134	regulation of response to stress	BP
GO:0090567	reproductive shoot system development	BP
GO:0090698	post-embryonic plant morphogenesis	BP
GO:0098542	defense response to other organism	BP
GO:0099402	plant organ development	BP
GO:1901564	organonitrogen compound metabolic process	BP
GO:1901565	organonitrogen compound catabolic process	BP
GO:1901575	organic substance catabolic process	BP
GO:1901700	response to oxygen-containing compound	BP
GO:1901701	cellular response to oxygen-containing compound	BP
GO:1902494	catalytic complex	CC
GO:1905392	plant organ morphogenesis	BP
GO:1905393	plant organ formation	BP
GO:1990234	transferase complex	CC

KEGG Term	Name	Description
map04075	Plant hormone signal transduction	-