Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G16G025163
View in Genome Browser
Position
chrG16:12342495-12343660 (-)
1165bp
Gene Type
gene
Gene Description (Protein Product)
Caspase domain
Organism
Populus alba x Populus glandulosa
Also AS Potri.016G024500AT5G04200Potri.016G024500.v4.1

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G16G060895 Sorting nexin
Pop_G16G060816 Citrate synthase
Pop_UnG035614 Belongs to the ClpA ClpB family
Regulatory gene
Pop_A01G003858 ethylene-responsive transcription factor
Pop_A01G003933 DNA-binding domain in plant proteins such as APETALA2 and EREBPs
Pop_A01G003963 ethylene-responsive transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0006508 proteolysis BP
GO:0006807 nitrogen compound metabolic process BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008233 peptidase activity MF
GO:0008234 cysteine-type peptidase activity MF
GO:0016787 hydrolase activity MF
GO:0019538 protein metabolic process BP
GO:0043170 macromolecule metabolic process BP
GO:0044238 primary metabolic process BP
GO:0048046 apoplast CC
GO:0070011 peptidase activity MF
GO:0071704 organic substance metabolic process BP
GO:0140096 catalytic activity, acting on a protein MF
GO:1901564 organonitrogen compound metabolic process BP