Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
Pop_G16G060806
View in Genome Browser
Position
chrG16:6679803-6681856 (-)
2053bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the syntaxin family
Organism
Populus alba x Populus glandulosa
Also AS Potri.016G088200AT3G09740Potri.016G088200.v4.1

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G19G009287 Belongs to the syntaxin family
Pop_G19G009288 Belongs to the syntaxin family
Pop_G18G083269 Belongs to the syntaxin family
Regulatory gene
Pop_A01G003801 transcription factor
Pop_A01G004132 transcription factor
Pop_A01G004498 Tesmin/TSO1-like CXC domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000149 SNARE binding MF
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005484 SNAP receptor activity MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006605 protein targeting BP
GO:0006612 protein targeting to membrane BP
GO:0006810 transport BP
GO:0006886 intracellular protein transport BP
GO:0006906 vesicle fusion BP
GO:0006996 organelle organization BP
GO:0008104 protein localization BP
GO:0008150 biological_process BP
GO:0008565 obsolete protein transporter activity MF
GO:0009506 plasmodesma CC
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0015031 protein transport BP
GO:0015833 peptide transport BP
GO:0016020 membrane CC
GO:0016021 membrane CC
GO:0016043 cellular component organization BP
GO:0016050 vesicle organization BP
GO:0016192 vesicle-mediated transport BP
GO:0022406 membrane docking BP
GO:0030054 cell junction CC
GO:0031201 SNARE complex CC
GO:0031224 obsolete intrinsic component of membrane CC
GO:0032991 protein-containing complex CC
GO:0033036 macromolecule localization BP
GO:0034613 protein localization BP
GO:0042886 amide transport BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044425 obsolete membrane part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045184 establishment of protein localization BP
GO:0046907 intracellular transport BP
GO:0048278 vesicle docking BP
GO:0048284 organelle fusion BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051640 organelle localization BP
GO:0051641 cellular localization BP
GO:0051649 establishment of localization in cell BP
GO:0055044 symplast CC
GO:0061024 membrane organization BP
GO:0061025 membrane fusion BP
GO:0070727 cellular macromolecule localization BP
GO:0071702 organic substance transport BP
GO:0071705 nitrogen compound transport BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071944 cell periphery CC
GO:0072657 protein localization to membrane BP
GO:0090150 establishment of protein localization to membrane BP
GO:0090174 organelle membrane fusion BP
GO:0098796 membrane protein complex CC
GO:0140056 organelle localization by membrane tethering BP
KEGG Term Name Description
map04130 SNARE interactions in vesicular transport -