Basic Information
Gene ID
Pop_G18G078394
Position
chrG18:12666672-12669780 (-)
3108bp
Gene Type
gene
Gene Description (Protein Product)
Stromal cell-derived factor 2-like
Organism
Also AS Potri.018G020700AT2G25110Potri.018G020700.v4.1

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
Pop_G18G078394 Stromal cell-derived factor 2-like
Pop_G18G080214 Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit
Pop_G19G007582 E3 ubiquitin-protein ligase
Regulatory gene
Pop_A01G004498 Tesmin/TSO1-like CXC domain
Pop_A01G032290 tesmin TSO1-like CXC
Pop_A01G056931 Dof zinc finger protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
GO Term Description GO Category
GO:0000030 mannosyltransferase activity MF
GO:0002682 regulation of immune system process BP
GO:0002684 positive regulation of immune system process BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006464 protein modification process BP
GO:0006486 protein glycosylation BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009058 biosynthetic process BP
GO:0009059 macromolecule biosynthetic process BP
GO:0009100 glycoprotein metabolic process BP
GO:0009101 glycoprotein biosynthetic process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009617 response to bacterium BP
GO:0009620 response to fungus BP
GO:0009987 cellular process BP
GO:0012505 endomembrane system CC
GO:0016740 transferase activity MF
GO:0016757 glycosyltransferase activity MF
GO:0016758 hexosyltransferase activity MF
GO:0019538 protein metabolic process BP
GO:0031347 regulation of defense response BP
GO:0031349 positive regulation of defense response BP
GO:0034645 cellular macromolecule biosynthetic process BP
GO:0035821 modulation of process of another organism BP
GO:0036211 protein modification process BP
GO:0042742 defense response to bacterium BP
GO:0043170 macromolecule metabolic process BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043412 macromolecule modification BP
GO:0043413 macromolecule glycosylation BP
GO:0044003 modulation by symbiont of host process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044260 cellular macromolecule metabolic process BP
GO:0044267 protein metabolic process BP
GO:0044403 biological process involved in symbiotic interaction BP
GO:0044419 biological process involved in interspecies interaction between organisms BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0045088 regulation of innate immune response BP
GO:0045089 positive regulation of innate immune response BP
GO:0048518 positive regulation of biological process BP
GO:0048583 regulation of response to stimulus BP
GO:0048584 positive regulation of response to stimulus BP
GO:0050776 regulation of immune response BP
GO:0050778 positive regulation of immune response BP
GO:0050789 regulation of biological process BP
GO:0050832 defense response to fungus BP
GO:0050896 response to stimulus BP
GO:0051701 biological process involved in interaction with host BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051817 obsolete modulation of process of other organism involved in symbiotic interaction BP
GO:0052031 modulation by symbiont of host defense response BP
GO:0052033 obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response BP
GO:0052166 induction by symbiont of host innate immune response BP
GO:0052167 modulation by symbiont of host innate immune response BP
GO:0052169 obsolete pathogen-associated molecular pattern dependent modulation by symbiont of host innate immune response BP
GO:0052173 response to defenses of other organism BP
GO:0052200 response to host defenses BP
GO:0052255 modulation by symbiont of host defense response BP
GO:0052257 obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction BP
GO:0052305 induction by symbiont of host innate immune response BP
GO:0052306 modulation by symbiont of host innate immune response BP
GO:0052308 obsolete pathogen-associated molecular pattern dependent modulation by organism of innate immune response in other organism involved in symbiotic interaction BP
GO:0052509 induction by symbiont of host defense response BP
GO:0052510 induction by symbiont of host defense response BP
GO:0052552 modulation by symbiont of host immune response BP
GO:0052553 modulation by symbiont of host immune response BP
GO:0052555 induction by symbiont of host immune response BP
GO:0052556 induction by symbiont of host immune response BP
GO:0052564 response to host immune response BP
GO:0052572 response to host immune response BP
GO:0065007 biological regulation BP
GO:0070085 glycosylation BP
GO:0071704 organic substance metabolic process BP
GO:0075136 response to host BP
GO:0080134 regulation of response to stress BP
GO:0097502 mannosylation BP
GO:0098542 defense response to other organism BP
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901566 organonitrogen compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP