Basic Information
Gene ID
AALBA5B319994
Position
aalba5_s00101598:19878-20703 (+)
825bp
Gene Type
gene
Gene Description (Protein Product)
nuclear transport
Organism
Also AS AT3G56900

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B660369 Belongs to the WD repeat SEC13 family
AALBA5B718083 ATP-dependent RNA helicase
AALBA5B676188 Belongs to the WD repeat SEC13 family
Regulatory gene
AALBA5B013896 lysine-specific demethylase
AALBA5B023305 dof zinc finger protein
AALBA5B043151 homeobox-leucine zipper protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03013 RNA transport RNA transport from the nucleus to the cytoplasm is fundamental for gene expression. The different RNA species that are produced in the nucleus are exported through the nuclear pore complexes (NPCs) via mobile export receptors. The majority of RNAs, such as tRNAs, rRNAs, and U snRNAs, are transported by specific export receptors, which belong to the karyopherin-beta family proteins. A feature of karyopherins is their regulation by the small GTPase Ran. However, general mRNA export is mechanistically different. Nuclear export of mRNAs is functionally coupled to different steps in gene expression processes, such as transcription, splicing, 3'-end formation and even translation.