Basic Information
Gene ID
AALBA5B558417
Position
aalba5_s00025444:15254-24082 (+)
8828bp
Gene Type
gene
Gene Description (Protein Product)
Arginine serine-rich-splicing factor
Organism
Also AS AT3G61860

Gene Structure

upstream:

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B831843 pre-mRNA-splicing factor
AALBA5B910941 Pre-mRNA-splicing factor
AALBA5B658996 Transportin-3
Regulatory gene
AALBA5B013896 lysine-specific demethylase
AALBA5B055678 zinc finger
AALBA5B057320 Protein BASIC PENTACYSTEINE2-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.