Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AALBA5B874132
Position
aalba5_s00070295:1759-6401 (+)
4642bp
Gene Type
gene
Gene Description (Protein Product)
Arginine serine-rich-splicing factor
Organism
Abies alba
Also AS AT3G61860

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AALBA5B910941 Pre-mRNA-splicing factor
AALBA5B992183 Transportin-3
AALBA5B933416 pre-mRNA-splicing factor
Regulatory gene
AALBA5B001463 Myb family transcription factor APL
AALBA5B008240 Squamosa promoter-binding-like protein
AALBA5B008339 Dehydration-responsive element-binding protein 3-like

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map03040 Spliceosome After transcription, eukaryotic mRNA precursors contain protein-coding exons and noncoding introns. In the following splicing, introns are excised and exons are joined by a macromolecular complex, the spliceosome. The standard spliceosome is made up of five small nuclear ribonucleoproteins (snRNPs), U1, U2, U4, U5, and U6 snRNPs, and several spliceosome-associated proteins (SAPs). Spliceosomes are not a simple stable complex, but a dynamic family of particles that assemble on the mRNA precursor and help fold it into a conformation that allows transesterification to proceed. Various spliceosome forms (e.g. A-, B- and C-complexes) have been identified.