PPGR - Gene Detail

Gene ID	AALBA5B951116
Position	aalba5_s00043850:40434-41078 (-) 644bp
Gene Type	gene
Gene Description (Protein Product)	ABC transporter B family member
Organism	Abies alba
Also AS	AT1G02520

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	AALBA5B951116 ABC transporter B family member AALBA5B990968 Belongs to the 14-3-3 family AALBA5B986399 Belongs to the 14-3-3 family
Regulatory gene	AALBA5B002813 SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains AALBA5B023305 dof zinc finger protein AALBA5B027223 WRKY Transcription Factor

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005215	transporter activity	MF
GO:0005575	cellular_component	CC
GO:0005623	obsolete cell	CC
GO:0005886	plasma membrane	CC
GO:0005911	cell-cell junction	CC
GO:0006810	transport	BP
GO:0008150	biological_process	BP
GO:0009506	plasmodesma	CC
GO:0009914	hormone transport	BP
GO:0009926	auxin polar transport	BP
GO:0009966	regulation of signal transduction	BP
GO:0010315	auxin export across the plasma membrane	BP
GO:0010329	auxin efflux transmembrane transporter activity	MF
GO:0010540	basipetal auxin transport	BP
GO:0010646	regulation of cell communication	BP
GO:0010817	regulation of hormone levels	BP
GO:0010928	regulation of auxin mediated signaling pathway	BP
GO:0015562	efflux transmembrane transporter activity	MF
GO:0016020	membrane	CC
GO:0022857	transmembrane transporter activity	MF
GO:0023051	regulation of signaling	BP
GO:0030054	cell junction	CC
GO:0044464	obsolete cell part	CC
GO:0048583	regulation of response to stimulus	BP
GO:0050789	regulation of biological process	BP
GO:0050794	regulation of cellular process	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0055044	symplast	CC
GO:0055085	transmembrane transport	BP
GO:0060918	auxin transport	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0071944	cell periphery	CC
GO:0080161	auxin transmembrane transporter activity	MF

KEGG Term	Name	Description
map02010	ABC transporters	The ATP-binding cassette (ABC) transporters form one of the largest known protein families, and are widespread in bacteria, archaea, and eukaryotes. They couple ATP hydrolysis to active transport of a wide variety of substrates such as ions, sugars, lipids, sterols, peptides, proteins, and drugs. The structure of a prokaryotic ABC transporter usually consists of three components; typically two integral membrane proteins each having six transmembrane segments, two peripheral proteins that bind and hydrolyze ATP, and a periplasmic (or lipoprotein) substrate-binding protein. Many of the genes for the three components form operons as in fact observed in many bacterial and archaeal genomes. On the other hand, in a typical eukaryotic ABC transporter, the membrane spanning protein and the ATP-binding protein are fused, forming a multi-domain protein with the membrane-spanning domain (MSD) and the nucleotide-binding domain (NBD).