Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
EVM0027292
View in Genome Browser
Position
GWHASIS00000025:8753637-8755013 (-)
1376bp
Gene Type
gene
Gene Description (Protein Product)
Rhamnose biosynthetic enzyme
Organism
Acer catalpifolium
Also AS AT1G63000

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
EVM0027292 Rhamnose biosynthetic enzyme
EVM0027474 UDP-glucuronate 4-epimerase
EVM0030206 Ubiquitin exists either covalently attached to another protein; or free (unanchored). When covalently bound; it is conjugated to target proteins via an isopeptide bond either as a monomer (monoubiquitin); a polymer linked via different Lys residues of the ubiquitin (polyubiquitin chains) or a linear polymer linked via the initiator Met of the ubiquitin (linear polyubiquitin chains). Polyubiquitin chains; when attached to a target protein; have different functions depending on the Lys residue of the ubiquitin that is linked
Regulatory gene
EVM0001315 transcription factor that promotes early floral meristem identity in synergy with APETALA1; FRUITFULL and LEAFY. Is required subsequently for the transition of an inflorescence meristem into a floral meristem. Seems to be partially redundant to the function of APETALA1
EVM0003629 MADS-box protein
EVM0005245 MADS-box protein

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005576 extracellular region CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006810 transport BP
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0008830 dTDP-4-dehydrorhamnose 3,5-epimerase activity MF
GO:0008831 dTDP-4-dehydrorhamnose reductase activity MF
GO:0009058 biosynthetic process BP
GO:0009225 nucleotide-sugar metabolic process BP
GO:0009226 nucleotide-sugar biosynthetic process BP
GO:0009506 plasmodesma CC
GO:0009812 flavonoid metabolic process BP
GO:0009813 flavonoid biosynthetic process BP
GO:0009914 hormone transport BP
GO:0009966 regulation of signal transduction BP
GO:0009987 cellular process BP
GO:0010253 UDP-rhamnose biosynthetic process BP
GO:0010280 UDP-L-rhamnose synthase activity MF
GO:0010315 auxin export across the plasma membrane BP
GO:0010489 UDP-4-keto-6-deoxy-glucose-3,5-epimerase activity MF
GO:0010490 UDP-4-keto-rhamnose-4-keto-reductase activity MF
GO:0010646 regulation of cell communication BP
GO:0010817 regulation of hormone levels BP
GO:0010928 regulation of auxin mediated signaling pathway BP
GO:0016020 membrane CC
GO:0016491 oxidoreductase activity MF
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors MF
GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor MF
GO:0016829 lyase activity MF
GO:0016835 carbon-oxygen lyase activity MF
GO:0016836 hydro-lyase activity MF
GO:0016853 isomerase activity MF
GO:0016854 racemase and epimerase activity MF
GO:0016857 racemase and epimerase activity, acting on carbohydrates and derivatives MF
GO:0018130 heterocycle biosynthetic process BP
GO:0019305 dTDP-rhamnose biosynthetic process BP
GO:0019438 aromatic compound biosynthetic process BP
GO:0023051 regulation of signaling BP
GO:0030054 cell junction CC
GO:0030154 cell differentiation BP
GO:0032502 developmental process BP
GO:0033478 UDP-rhamnose metabolic process BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0034654 nucleobase-containing compound biosynthetic process BP
GO:0042127 regulation of cell population proliferation BP
GO:0042440 pigment metabolic process BP
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044249 cellular biosynthetic process BP
GO:0044271 cellular nitrogen compound biosynthetic process BP
GO:0044281 small molecule metabolic process BP
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046148 pigment biosynthetic process BP
GO:0046383 dTDP-rhamnose metabolic process BP
GO:0046483 heterocycle metabolic process BP
GO:0048046 apoplast CC
GO:0048583 regulation of response to stimulus BP
GO:0048869 cellular developmental process BP
GO:0050377 UDP-glucose 4,6-dehydratase activity MF
GO:0050789 regulation of biological process BP
GO:0050794 regulation of cellular process BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0051552 flavone metabolic process BP
GO:0051553 flavone biosynthetic process BP
GO:0051554 flavonol metabolic process BP
GO:0051555 flavonol biosynthetic process BP
GO:0055044 symplast CC
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0055114 obsolete oxidation-reduction process BP
GO:0060918 auxin transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071704 organic substance metabolic process BP
GO:0071944 cell periphery CC
GO:1901135 carbohydrate derivative metabolic process BP
GO:1901137 carbohydrate derivative biosynthetic process BP
GO:1901360 organic cyclic compound metabolic process BP
GO:1901362 organic cyclic compound biosynthetic process BP
GO:1901576 organic substance biosynthetic process BP
GO:1901615 organic hydroxy compound metabolic process BP
GO:1901617 organic hydroxy compound biosynthetic process BP
KEGG Term Name Description
map01110 Biosynthesis of secondary metabolites -
map01100 Metabolic pathways -
map00523 Polyketide sugar unit biosynthesis -
map00520 Amino sugar and nucleotide sugar metabolism -