PPGR - Gene Detail

Basic Information

Gene ID	gene-Apse006G0159000 View in Genome Browser
Position	GWHBECT00000006:41721130-41723977 (-) 2847bp
Gene Type	gene
Gene Description (Protein Product)	Protein SCO1 homolog 2
Organism	Acer pseudosieboldianum
Also AS	AT4G39740

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

gene-Apse011G0110700 Chloroplast-localized elongation factor EF-G involved in protein synthesis in plastids. Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step; the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A- site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites; respectively. Catalyzes the coordinated movement of the two tRNA molecules; the mRNA and conformational changes in the ribosome

gene-Apse010G0172500 Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex; the final protein carrier in the mitochondrial electron-transport chain

gene-Apse007G0150800 Protein SCO1 homolog 1

Regulatory gene

gene-Apse001G0041000 Protein ALWAYS EARLY

gene-Apse001G0076200 tesmin tso1-like cxc

gene-Apse001G0146300 Protein of unknown function (DUF3755)

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Expression Profile

DataSet	Number of Samples expressed(TPM>1)	Mean	Min	Max	Standard deviation(SD)	Coeffcient variation(CV)

Select Expression

Pathway

GO Term	Description	GO Category
GO:0008150	biological_process	BP
GO:0042592	homeostatic process	BP
GO:0048878	chemical homeostasis	BP
GO:0050801	monoatomic ion homeostasis	BP
GO:0055065	obsolete metal ion homeostasis	BP
GO:0055070	copper ion homeostasis	BP
GO:0055076	obsolete transition metal ion homeostasis	BP
GO:0055080	monoatomic cation homeostasis	BP
GO:0065007	biological regulation	BP
GO:0065008	regulation of biological quality	BP
GO:0098771	inorganic ion homeostasis	BP