Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Expresssion
Pathway
Basic Information
Gene ID
gene-Apse_Un091G0000100
View in Genome Browser
Position
GWHBECT00000044:12256-16966 (-)
4710bp
Gene Type
gene
Gene Description (Protein Product)
circadian regulation of calcium ion oscillation
Organism
Acer pseudosieboldianum
Also AS AT1G04400

Gene Structure

upstream:
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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
gene-Apse_Un091G0000100 circadian regulation of calcium ion oscillation
gene-Apse_Un104G0005400 E3 ubiquitin-protein ligase

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail

Expression Profile
DataSet Number of Samples expressed(TPM>1) Mean Min Max Standard deviation(SD) Coeffcient variation(CV)


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0000003 reproduction BP
GO:0000166 nucleotide binding MF
GO:0001101 response to acid chemical BP
GO:0002252 immune effector process BP
GO:0002376 immune system process BP
GO:0003006 developmental process involved in reproduction BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005515 protein binding MF
GO:0005524 ATP binding MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005654 nucleoplasm CC
GO:0005737 cytoplasm CC
GO:0005773 vacuole CC
GO:0006139 nucleobase-containing compound metabolic process BP
GO:0006325 chromatin organization BP
GO:0006338 chromatin remodeling BP
GO:0006725 cellular aromatic compound metabolic process BP
GO:0006732 obsolete coenzyme metabolic process BP
GO:0006753 nucleoside phosphate metabolic process BP
GO:0006793 phosphorus metabolic process BP
GO:0006796 phosphate-containing compound metabolic process BP
GO:0006807 nitrogen compound metabolic process BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006874 intracellular calcium ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0006996 organelle organization BP
GO:0007154 cell communication BP
GO:0007165 signal transduction BP
GO:0007275 multicellular organism development BP
GO:0007623 circadian rhythm BP
GO:0008144 obsolete drug binding MF
GO:0008150 biological_process BP
GO:0008152 metabolic process BP
GO:0009117 nucleotide metabolic process BP
GO:0009314 response to radiation BP
GO:0009414 response to water deprivation BP
GO:0009415 response to water BP
GO:0009416 response to light stimulus BP
GO:0009605 response to external stimulus BP
GO:0009606 tropism BP
GO:0009607 response to biotic stimulus BP
GO:0009615 response to virus BP
GO:0009628 response to abiotic stimulus BP
GO:0009637 response to blue light BP
GO:0009638 phototropism BP
GO:0009642 response to light intensity BP
GO:0009645 response to low light intensity stimulus BP
GO:0009646 response to absence of light BP
GO:0009648 photoperiodism BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009785 blue light signaling pathway BP
GO:0009791 post-embryonic development BP
GO:0009881 photoreceptor activity MF
GO:0009882 blue light photoreceptor activity MF
GO:0009888 tissue development BP
GO:0009893 positive regulation of metabolic process BP
GO:0009909 regulation of flower development BP
GO:0009911 positive regulation of flower development BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0010035 response to inorganic substance BP
GO:0010073 meristem maintenance BP
GO:0010075 regulation of meristem growth BP
GO:0010118 stomatal movement BP
GO:0010228 vegetative to reproductive phase transition of meristem BP
GO:0010244 response to low fluence blue light stimulus by blue low-fluence system BP
GO:0010617 circadian regulation of calcium ion oscillation BP
GO:0014070 response to organic cyclic compound BP
GO:0016043 cellular component organization BP
GO:0016604 nuclear body CC
GO:0017076 purine nucleotide binding MF
GO:0019222 regulation of metabolic process BP
GO:0019637 organophosphate metabolic process BP
GO:0019725 cellular homeostasis BP
GO:0022414 reproductive process BP
GO:0022603 regulation of anatomical structure morphogenesis BP
GO:0023052 signaling BP
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0030522 intracellular receptor signaling pathway BP
GO:0030554 adenyl nucleotide binding MF
GO:0031323 regulation of cellular metabolic process BP
GO:0031325 positive regulation of cellular metabolic process BP
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032559 adenyl ribonucleotide binding MF
GO:0033993 response to lipid BP
GO:0034641 cellular nitrogen compound metabolic process BP
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0038023 signaling receptor activity MF
GO:0040008 regulation of growth BP
GO:0042221 response to chemical BP
GO:0042592 homeostatic process BP
GO:0042726 flavin-containing compound metabolic process BP
GO:0042752 regulation of circadian rhythm BP
GO:0042802 identical protein binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044237 cellular metabolic process BP
GO:0044238 primary metabolic process BP
GO:0044281 small molecule metabolic process BP
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044428 obsolete nuclear part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044451 obsolete nucleoplasm part CC
GO:0044464 obsolete cell part CC
GO:0046483 heterocycle metabolic process BP
GO:0048037 obsolete cofactor binding MF
GO:0048507 meristem development BP
GO:0048509 regulation of meristem development BP
GO:0048511 rhythmic process BP
GO:0048518 positive regulation of biological process BP
GO:0048522 positive regulation of cellular process BP
GO:0048571 long-day photoperiodism BP
GO:0048573 photoperiodism, flowering BP
GO:0048574 long-day photoperiodism, flowering BP
GO:0048580 regulation of post-embryonic development BP
GO:0048582 positive regulation of post-embryonic development BP
GO:0048583 regulation of response to stimulus BP
GO:0048608 reproductive structure development BP
GO:0048638 regulation of developmental growth BP
GO:0048731 system development BP
GO:0048831 regulation of shoot system development BP
GO:0048856 anatomical structure development BP
GO:0048878 chemical homeostasis BP
GO:0050660 flavin adenine dinucleotide binding MF
GO:0050662 obsolete coenzyme binding MF
GO:0050789 regulation of biological process BP
GO:0050793 regulation of developmental process BP
GO:0050794 regulation of cellular process BP
GO:0050801 monoatomic ion homeostasis BP
GO:0050896 response to stimulus BP
GO:0051094 positive regulation of developmental process BP
GO:0051186 obsolete cofactor metabolic process BP
GO:0051239 regulation of multicellular organismal process BP
GO:0051240 positive regulation of multicellular organismal process BP
GO:0051276 chromosome organization BP
GO:0051480 regulation of cytosolic calcium ion concentration BP
GO:0051607 defense response to virus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0051716 cellular response to stimulus BP
GO:0055065 obsolete metal ion homeostasis BP
GO:0055074 calcium ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055086 nucleobase-containing small molecule metabolic process BP
GO:0060089 molecular transducer activity MF
GO:0061458 reproductive system development BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0070013 intracellular organelle lumen CC
GO:0071214 cellular response to abiotic stimulus BP
GO:0071478 cellular response to radiation BP
GO:0071482 cellular response to light stimulus BP
GO:0071483 cellular response to blue light BP
GO:0071704 organic substance metabolic process BP
GO:0071840 cellular component organization or biogenesis BP
GO:0071949 FAD binding MF
GO:0072387 flavin adenine dinucleotide metabolic process BP
GO:0072503 obsolete cellular divalent inorganic cation homeostasis BP
GO:0072507 obsolete divalent inorganic cation homeostasis BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0098542 defense response to other organism BP
GO:0098771 inorganic ion homeostasis BP
GO:0104004 cellular response to environmental stimulus BP
GO:1900618 regulation of shoot system morphogenesis BP
GO:1901265 nucleoside phosphate binding MF
GO:1901360 organic cyclic compound metabolic process BP
GO:1901363 heterocyclic compound binding MF
GO:1901371 regulation of leaf morphogenesis BP
GO:1901564 organonitrogen compound metabolic process BP
GO:1901700 response to oxygen-containing compound BP
GO:1902347 response to strigolactone BP
GO:1905421 regulation of plant organ morphogenesis BP
GO:2000024 regulation of leaf development BP
GO:2000026 regulation of multicellular organismal development BP
GO:2000028 regulation of photoperiodism, flowering BP
GO:2000241 regulation of reproductive process BP
GO:2000243 positive regulation of reproductive process BP
GO:2000377 regulation of reactive oxygen species metabolic process BP
GO:2000379 positive regulation of reactive oxygen species metabolic process BP
KEGG Term Name Description
map04712 Circadian rhythm - plant -