PPGR - Gene Detail

Basic Information

Gene ID	Atru.chr8.325.g View in Genome Browser
Position	chr8:6213695-6219612 (-) 5917bp
Gene Type	gene
Gene Description (Protein Product)	Sec7 domain
Organism	Acer truncatum
Also AS	AT1G13980

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Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

Atru.chr8.325.g Sec7 domain

Atru.chr9.322.g PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Atru.chr9.91.g PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0003674	molecular_function	MF
GO:0005085	guanyl-nucleotide exchange factor activity	MF
GO:0005086	guanyl-nucleotide exchange factor activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005794	Golgi apparatus	CC
GO:0005802	trans-Golgi network	CC
GO:0006810	transport	BP
GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	BP
GO:0006897	endocytosis	BP
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0012505	endomembrane system	CC
GO:0016043	cellular component organization	BP
GO:0016192	vesicle-mediated transport	BP
GO:0019899	enzyme binding	MF
GO:0031984	organelle subcompartment	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044431	obsolete Golgi apparatus part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0048193	Golgi vesicle transport	BP
GO:0051020	GTPase binding	MF
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0065007	biological regulation	BP
GO:0065009	regulation of molecular function	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0080119	ER body organization	BP
GO:0098657	import into cell	BP
GO:0098772	molecular function regulator activity	MF
GO:0098791	Golgi apparatus subcompartment	CC

KEGG Term	Name	Description
map04144	Endocytosis	Endocytosis is a mechanism for cells to remove ligands, nutrients, and plasma membrane (PM) proteins, and lipids from the cell surface, bringing them into the cell interior. Transmembrane proteins entering through clathrin-dependent endocytosis (CDE) have sequences in their cytoplasmic domains that bind to the APs (adaptor-related protein complexes) and enable their rapid removal from the PM. In addition to APs and clathrin, there are numerous accessory proteins including dynamin. Depending on the various proteins that enter the endosome membrane, these cargoes are sorted to distinct destinations. Some cargoes, such as nutrient receptors, are recycled back to the PM. Ubiquitylated membrane proteins, such as activated growth-factor receptors, are sorted into intraluminal vesicles and eventually end up in the lysosome lumen via multivesicular endosomes (MVEs). There are distinct mechanisms of clathrin-independent endocytosis (CIE) depending upon the cargo and the cell type.