Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00001.43.v1.0.g
View in Genome Browser
Position
AmTr_scaff00001:699773-722545 (+)
22772bp
Gene Type
gene
Gene Description (Protein Product)
YLS2-like
Organism
Amborella trichopoda
Also AS AT3G51440AMTR_s00001p00067420

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00105.26.v1.0.g Guanine nucleotide-binding protein subunit beta-like protein
AmTr_scaff00056.54.v1.0.g Nuclear pore complex protein NUP35
AmTr_scaff00013.38.v1.0.g -
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0001101 response to acid chemical BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005783 endoplasmic reticulum CC
GO:0006950 response to stress BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009611 response to wounding BP
GO:0009615 response to virus BP
GO:0009620 response to fungus BP
GO:0009719 response to endogenous stimulus BP
GO:0009723 response to ethylene BP
GO:0009725 response to hormone BP
GO:0009751 response to salicylic acid BP
GO:0009753 response to jasmonic acid BP
GO:0010033 response to organic substance BP
GO:0012505 endomembrane system CC
GO:0014070 response to organic cyclic compound BP
GO:0016020 membrane CC
GO:0016787 hydrolase activity MF
GO:0016788 hydrolase activity, acting on ester bonds MF
GO:0042221 response to chemical BP
GO:0042493 response to xenobiotic stimulus BP
GO:0043207 response to external biotic stimulus BP
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
GO:0046677 response to antibiotic BP
GO:0050896 response to stimulus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:1901700 response to oxygen-containing compound BP