Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Basic Information
Gene ID
AmTr_scaff00002.648.v1.0.g
View in Genome Browser
Position
AmTr_scaff00002:11155904-11157596 (+)
1692bp
Gene Type
gene
Gene Description (Protein Product)
EKC KEOPS complex subunit
Organism
Amborella trichopoda
Also AS AT5G26110AMTR_s00002p00271930

Gene Structure

upstream:
Get Sequence

Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00045.82.v1.0.g Component of the EKC KEOPS complex that is required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. The complex is probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Likely plays a direct catalytic role in this reaction, but requires other protein(s) of the complex to fulfill this activity
AmTr_scaff00040.270.v1.0.g 3-deoxy-D-manno-octulosonic acid transferase
AmTr_scaff00069.7.v1.0.g Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance
Regulatory gene
AmTr_scaff00001.380.v1.0.g reveille
AmTr_scaff00001.511.v1.0.g Protein LHY-like isoform X1
AmTr_scaff00002.587.v1.0.g ZINC FINGER protein

Load All Networks

Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail