Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00001.511.v1.0.g
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Position
AmTr_scaff00001:11659667-11687371 (+)
27704bp
Gene Type
gene
Gene Description (Protein Product)
Protein LHY-like isoform X1
Organism
Amborella trichopoda
Also AS AT1G01060AMTR_s00001p00272270

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00036.83.v1.0.g Protein EARLY FLOWERING
AmTr_scaff00023.165.v1.0.g Two-component response regulator-like
AmTr_scaff00137.46.v1.0.g belongs to the protein kinase superfamily
Regulatory gene
AmTr_scaff00006.175.v1.0.g bpc6, bbr bpc6, atbpc6 atbpc6
AmTr_scaff00024.47.v1.0.g Protein BASIC PENTACYSTEINE2-like
AmTr_scaff00185.21.v1.0.g Protein BASIC PENTACYSTEINE6-like
Target gene
AmTr_scaff00001.104.v1.0.g Protein CHAPERONE-LIKE PROTEIN OF POR1-like
AmTr_scaff00001.114.v1.0.g Ankyrin repeat domain-containing protein
AmTr_scaff00001.117.v1.0.g RNA recognition motif

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
KEGG Pathway
KEGG Term Name Description
map04712 Circadian rhythm - plant -