PPGR - Gene Detail

Gene ID	AmTr_scaff00011.158.v1.0.g View in Genome Browser
Position	AmTr_scaff00011:6563752-6570129 (-) 6377bp
Gene Type	gene
Gene Description (Protein Product)	Thylakoid lumenal protein
Organism	Amborella trichopoda
Also AS	AT1G12250AMTR_s00011p00252360

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	AmTr_scaff00140.51.v1.0.g Malate dehydrogenase AmTr_scaff00048.87.v1.0.g Phosphoribulokinase AmTr_scaff00111.126.v1.0.g Belongs to the carbohydrate kinase PfkB family
Regulatory gene	AmTr_scaff00001.225.v1.0.g Floral homeotic protein AmTr_scaff00001.409.v1.0.g MADS-box protein AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0009507	chloroplast	CC
GO:0009534	chloroplast thylakoid	CC
GO:0009535	chloroplast thylakoid membrane	CC
GO:0009536	plastid	CC
GO:0009579	thylakoid	CC
GO:0016020	membrane	CC
GO:0031976	plastid thylakoid	CC
GO:0031984	organelle subcompartment	CC
GO:0034357	photosynthetic membrane	CC
GO:0042651	thylakoid membrane	CC
GO:0043226	organelle	CC
GO:0043227	membrane-bounded organelle	CC
GO:0043229	intracellular organelle	CC
GO:0043231	intracellular membrane-bounded organelle	CC
GO:0044422	obsolete organelle part	CC
GO:0044424	obsolete intracellular part	CC
GO:0044434	obsolete chloroplast part	CC
GO:0044435	obsolete plastid part	CC
GO:0044436	obsolete thylakoid part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044446	obsolete intracellular organelle part	CC
GO:0044464	obsolete cell part	CC
GO:0055035	plastid thylakoid membrane	CC