PPGR - Gene Detail

Basic Information

Gene ID	AmTr_scaff00018.58.v1.0.g View in Genome Browser
Position	AmTr_scaff00018:1677330-1678910 (+) 1580bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the oxygen-dependent FAD-linked oxidoreductase family
Organism	Amborella trichopoda
Also AS	AT5G44390AMTR_s00018p00124850

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00144.10.v1.0.g Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

AmTr_scaff00157.39.v1.0.g Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

AmTr_scaff00046.90.v1.0.g Belongs to the peroxidase family. Classical plant (class III) peroxidase subfamily

Regulatory gene

AmTr_scaff00001.217.v1.0.g Transcriptional activator that specifically binds 5'- GATA-3' or 5'-GAT-3' motifs within gene promoters

AmTr_scaff00001.35.v1.0.g Squamosa promoter-binding-like protein

AmTr_scaff00002.171.v1.0.g GATA transcription factor

Load All Networks

Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

KEGG Term	Name	Description
map01110	Biosynthesis of secondary metabolites	-
map01100	Metabolic pathways	-
map00940	Phenylpropanoid biosynthesis	Phenylpropanoids are a group of plant secondary metabolites derived from phenylalanine and having a wide variety of functions both as structural and signaling molecules. Phenylalanine is first converted to cinnamic acid by deamination. It is followed by hydroxylation and frequent methylation to generate coumaric acid and other acids with a phenylpropane (C6-C3) unit. Reduction of the CoA-activated carboxyl groups of these acids results in the corresponding aldehydes and alcohols. The alcohols are called monolignols, the starting compounds for biosynthesis of lignin.