Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00022.143.v1.0.g
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Position
AmTr_scaff00022:2160099-2167222 (+)
7123bp
Gene Type
gene
Gene Description (Protein Product)
SWI SNF complex subunit
Organism
Amborella trichopoda
Also AS AT2G33610AMTR_s00022p00147330

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00045.142.v1.0.g Chromatin structure-remodeling complex protein
AmTr_scaff00203.16.v1.0.g SWI SNF complex subunit
AmTr_scaff00059.47.v1.0.g SWI SNF complex subunit
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000228 nuclear chromosome CC
GO:0000785 chromatin CC
GO:0000790 chromatin CC
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005634 nucleus CC
GO:0005694 chromosome CC
GO:0006325 chromatin organization BP
GO:0006338 chromatin remodeling BP
GO:0006996 organelle organization BP
GO:0008150 biological_process BP
GO:0009987 cellular process BP
GO:0016043 cellular component organization BP
GO:0016514 SWI/SNF complex CC
GO:0031974 membrane-enclosed lumen CC
GO:0031981 nuclear lumen CC
GO:0032991 protein-containing complex CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043228 non-membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0043232 intracellular non-membrane-bounded organelle CC
GO:0043233 organelle lumen CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044427 obsolete chromosomal part CC
GO:0044428 obsolete nuclear part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044454 obsolete nuclear chromosome part CC
GO:0044464 obsolete cell part CC
GO:0051276 chromosome organization BP
GO:0070013 intracellular organelle lumen CC
GO:0070603 SWI/SNF superfamily-type complex CC
GO:0071840 cellular component organization or biogenesis BP
GO:1902494 catalytic complex CC
GO:1904949 ATPase complex CC