Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00047.12.v1.0.g
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Position
AmTr_scaff00047:632248-638396 (+)
6148bp
Gene Type
gene
Gene Description (Protein Product)
oligopeptide transporter
Organism
Amborella trichopoda
Also AS AT4G16370AMTR_s00047p00062520

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00101.25.v1.0.g ubiquitin-NEDD8-like protein
AmTr_scaff00103.83.v1.0.g metal-nicotianamine transporter
AmTr_scaff00103.82.v1.0.g metal-nicotianamine transporter
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000041 transition metal ion transport BP
GO:0003674 molecular_function MF
GO:0005215 transporter activity MF
GO:0005575 cellular_component CC
GO:0005623 obsolete cell CC
GO:0005886 plasma membrane CC
GO:0005911 cell-cell junction CC
GO:0006810 transport BP
GO:0006811 monoatomic ion transport BP
GO:0006812 monoatomic cation transport BP
GO:0006826 iron ion transport BP
GO:0006873 intracellular monoatomic ion homeostasis BP
GO:0006875 obsolete intracellular metal ion homeostasis BP
GO:0008150 biological_process BP
GO:0008324 monoatomic cation transmembrane transporter activity MF
GO:0009506 plasmodesma CC
GO:0009987 cellular process BP
GO:0010232 vascular transport BP
GO:0010233 phloem transport BP
GO:0015075 monoatomic ion transmembrane transporter activity MF
GO:0015318 inorganic molecular entity transmembrane transporter activity MF
GO:0016020 membrane CC
GO:0019725 cellular homeostasis BP
GO:0022857 transmembrane transporter activity MF
GO:0022890 inorganic cation transmembrane transporter activity MF
GO:0030001 metal ion transport BP
GO:0030003 intracellular monoatomic cation homeostasis BP
GO:0030054 cell junction CC
GO:0032501 multicellular organismal process BP
GO:0034220 monoatomic ion transmembrane transport BP
GO:0042592 homeostatic process BP
GO:0044464 obsolete cell part CC
GO:0046873 metal ion transmembrane transporter activity MF
GO:0046915 transition metal ion transmembrane transporter activity MF
GO:0048878 chemical homeostasis BP
GO:0050801 monoatomic ion homeostasis BP
GO:0051179 localization BP
GO:0051234 establishment of localization BP
GO:0055044 symplast CC
GO:0055065 obsolete metal ion homeostasis BP
GO:0055072 iron ion homeostasis BP
GO:0055076 obsolete transition metal ion homeostasis BP
GO:0055080 monoatomic cation homeostasis BP
GO:0055082 intracellular chemical homeostasis BP
GO:0055085 transmembrane transport BP
GO:0065007 biological regulation BP
GO:0065008 regulation of biological quality BP
GO:0071944 cell periphery CC
GO:0098655 monoatomic cation transmembrane transport BP
GO:0098771 inorganic ion homeostasis BP
GO:1990388 xylem-to-phloem iron transport BP