PPGR - Gene Detail

Basic Information

Gene ID	AmTr_scaff00052.89.v1.0.g View in Genome Browser
Position	AmTr_scaff00052:3496307-3506151 (-) 9844bp
Gene Type	gene
Gene Description (Protein Product)	"component of the eukaryotic translation initiation factor 3 (eIF-3) complex
Organism	Amborella trichopoda
Also AS	AT2G46290AMTR_s00052p00194740

upstream:

Domain

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Regulation&Interaction

Protein-protein interaction (PPI)

AmTr_scaff00102.29.v1.0.g component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

AmTr_scaff00087.43.v1.0.g component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

AmTr_scaff00077.114.v1.0.g Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation

Regulatory gene

AmTr_scaff00001.225.v1.0.g Floral homeotic protein

AmTr_scaff00001.409.v1.0.g MADS-box protein

AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

Pathway

GO Term	Description	GO Category
GO:0000151	ubiquitin ligase complex	CC
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0005829	cytosol	CC
GO:0006950	response to stress	BP
GO:0006970	response to osmotic stress	BP
GO:0008150	biological_process	BP
GO:0009628	response to abiotic stimulus	BP
GO:0009651	response to salt stress	BP
GO:0010035	response to inorganic substance	BP
GO:0010038	response to metal ion	BP
GO:0031461	cullin-RING ubiquitin ligase complex	CC
GO:0032991	protein-containing complex	CC
GO:0042221	response to chemical	BP
GO:0044424	obsolete intracellular part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0046686	response to cadmium ion	BP
GO:0050896	response to stimulus	BP
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	CC
GO:1902494	catalytic complex	CC
GO:1990234	transferase complex	CC