PPGR - Gene Detail

Gene ID	AmTr_scaff00054.20.v1.0.g View in Genome Browser
Position	AmTr_scaff00054:489777-513666 (-) 23889bp
Gene Type	gene
Gene Description (Protein Product)	Belongs to the syntaxin family
Organism	Amborella trichopoda
Also AS	AT3G09740AMTR_s00054p00051700

upstream:

Database	EntryID	E-Value	Start	end	InterPro ID	Description

Protein-protein interaction (PPI)	AmTr_scaff00057.87.v1.0.g Belongs to the syntaxin family AmTr_scaff00103.72.v1.0.g Belongs to the syntaxin family AmTr_scaff00111.115.v1.0.g Belongs to the syntaxin family
Regulatory gene	AmTr_scaff00001.225.v1.0.g Floral homeotic protein AmTr_scaff00001.409.v1.0.g MADS-box protein AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

Load All Networks

Orthologous ID	Species Number	All hits in PereRegDB	Hits of this species	Orthologous Detail

GO Term	Description	GO Category
GO:0000149	SNARE binding	MF
GO:0003674	molecular_function	MF
GO:0005484	SNAP receptor activity	MF
GO:0005488	binding	MF
GO:0005515	protein binding	MF
GO:0005575	cellular_component	CC
GO:0005622	intracellular anatomical structure	CC
GO:0005623	obsolete cell	CC
GO:0005737	cytoplasm	CC
GO:0006810	transport	BP
GO:0006906	vesicle fusion	BP
GO:0006996	organelle organization	BP
GO:0008150	biological_process	BP
GO:0009987	cellular process	BP
GO:0012505	endomembrane system	CC
GO:0016020	membrane	CC
GO:0016043	cellular component organization	BP
GO:0016050	vesicle organization	BP
GO:0016192	vesicle-mediated transport	BP
GO:0022406	membrane docking	BP
GO:0031201	SNARE complex	CC
GO:0032991	protein-containing complex	CC
GO:0044424	obsolete intracellular part	CC
GO:0044425	obsolete membrane part	CC
GO:0044444	obsolete cytoplasmic part	CC
GO:0044464	obsolete cell part	CC
GO:0048278	vesicle docking	BP
GO:0048284	organelle fusion	BP
GO:0051179	localization	BP
GO:0051234	establishment of localization	BP
GO:0051640	organelle localization	BP
GO:0051641	cellular localization	BP
GO:0061024	membrane organization	BP
GO:0061025	membrane fusion	BP
GO:0071840	cellular component organization or biogenesis	BP
GO:0090174	organelle membrane fusion	BP
GO:0098796	membrane protein complex	CC
GO:0140056	organelle localization by membrane tethering	BP

KEGG Term	Name	Description
map04130	SNARE interactions in vesicular transport	-