Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00056.146.v1.0.g
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Position
AmTr_scaff00056:2644933-2651975 (+)
7042bp
Gene Type
gene
Gene Description (Protein Product)
pectinesterase
Organism
Amborella trichopoda
Also AS AT5G19730AMTR_s00056p00166920

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00120.52.v1.0.g Pectate lyase
AmTr_scaff00103.74.v1.0.g Polygalacturonase
AmTr_scaff00484.1.v1.0.g Pectate lyase
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005618 cell wall CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0030312 external encapsulating structure CC
GO:0044424 obsolete intracellular part CC
GO:0044464 obsolete cell part CC
GO:0071944 cell periphery CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00040 Pentose and glucuronate interconversions -