Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00058.229.v1.0.g
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Position
AmTr_scaff00058:4236285-4236841 (+)
556bp
Gene Type
gene
Gene Description (Protein Product)
"Catalyzes the conversion of 7
Organism
Amborella trichopoda
Also AS AT5G62980AMTR_s00058p00214740

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00109.60.v1.0.g Branched-chain-amino-acid aminotransferase-like protein 3
AmTr_scaff00058.93.v1.0.g Branched-chain-amino-acid aminotransferase-like protein 3
AmTr_scaff00099.141.v1.0.g 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway KEGG Pathway
GO Term Description GO Category
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0004150 dihydroneopterin aldolase activity MF
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0005829 cytosol CC
GO:0016829 lyase activity MF
GO:0016830 carbon-carbon lyase activity MF
GO:0016832 aldehyde-lyase activity MF
GO:0044424 obsolete intracellular part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044464 obsolete cell part CC
KEGG Term Name Description
map01100 Metabolic pathways -
map00790 Folate biosynthesis -