Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00059.86.v1.0.g
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Position
AmTr_scaff00059:1384742-1390492 (+)
5750bp
Gene Type
gene
Gene Description (Protein Product)
phosphatase 2C
Organism
Amborella trichopoda
Also AS AT4G16580AMTR_s00059p00109810

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00070.11.v1.0.g Ubiquitin system component Cue protein
AmTr_scaff00111.44.v1.0.g anaphase-promoting complex subunit
AmTr_scaff00077.116.v1.0.g Probable zinc-ribbon domain
Regulatory gene
AmTr_scaff00001.233.v1.0.g Protein SHI RELATED SEQUENCE
AmTr_scaff00001.380.v1.0.g reveille
AmTr_scaff00001.511.v1.0.g Protein LHY-like isoform X1

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0005575 cellular_component CC
GO:0005622 intracellular anatomical structure CC
GO:0005623 obsolete cell CC
GO:0005737 cytoplasm CC
GO:0009507 chloroplast CC
GO:0009532 plastid stroma CC
GO:0009536 plastid CC
GO:0009570 chloroplast stroma CC
GO:0043226 organelle CC
GO:0043227 membrane-bounded organelle CC
GO:0043229 intracellular organelle CC
GO:0043231 intracellular membrane-bounded organelle CC
GO:0044422 obsolete organelle part CC
GO:0044424 obsolete intracellular part CC
GO:0044434 obsolete chloroplast part CC
GO:0044435 obsolete plastid part CC
GO:0044444 obsolete cytoplasmic part CC
GO:0044446 obsolete intracellular organelle part CC
GO:0044464 obsolete cell part CC