Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00060.154.v1.0.g
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Position
AmTr_scaff00060:4039895-4070946 (-)
31051bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the small GTPase superfamily. Arf family
Organism
Amborella trichopoda
Also AS AT5G37680AMTR_s00060p00209750

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00109.155.v1.0.g Protein phosphatase 2C and cyclic nucleotide-binding kinase domain-containing
AmTr_scaff00101.25.v1.0.g ubiquitin-NEDD8-like protein
AmTr_scaff00072.128.v1.0.g Belongs to the STXBP unc-18 SEC1 family
Regulatory gene
AmTr_scaff00001.432.v1.0.g Transcription factor
AmTr_scaff00001.504.v1.0.g transcription factor
AmTr_scaff00002.15.v1.0.g helix loop helix domain

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000166 nucleotide binding MF
GO:0001882 nucleoside binding MF
GO:0001883 purine nucleoside binding MF
GO:0002252 immune effector process BP
GO:0002376 immune system process BP
GO:0003674 molecular_function MF
GO:0005488 binding MF
GO:0005525 GTP binding MF
GO:0006950 response to stress BP
GO:0006952 defense response BP
GO:0008150 biological_process BP
GO:0009605 response to external stimulus BP
GO:0009607 response to biotic stimulus BP
GO:0009615 response to virus BP
GO:0017076 purine nucleotide binding MF
GO:0019001 guanyl nucleotide binding MF
GO:0032549 ribonucleoside binding MF
GO:0032550 purine ribonucleoside binding MF
GO:0032553 ribonucleotide binding MF
GO:0032555 purine ribonucleotide binding MF
GO:0032561 guanyl ribonucleotide binding MF
GO:0035639 purine ribonucleoside triphosphate binding MF
GO:0036094 small molecule binding MF
GO:0043167 ion binding MF
GO:0043168 anion binding MF
GO:0043207 response to external biotic stimulus BP
GO:0050896 response to stimulus BP
GO:0051607 defense response to virus BP
GO:0051704 obsolete multi-organism process BP
GO:0051707 response to other organism BP
GO:0097159 organic cyclic compound binding MF
GO:0097367 carbohydrate derivative binding MF
GO:0098542 defense response to other organism BP
GO:1901265 nucleoside phosphate binding MF
GO:1901363 heterocyclic compound binding MF