Basic Information
Gene Structure
Domain
Regulation&
Interaction
Annotation
Orthologus Group
Pathway
Basic Information
Gene ID
AmTr_scaff00067.43.v1.0.g
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Position
AmTr_scaff00067:715631-716797 (+)
1166bp
Gene Type
gene
Gene Description (Protein Product)
Belongs to the Casparian strip membrane proteins (CASP) family
Organism
Amborella trichopoda
Also AS AT5G15290AMTR_s00067p00068460

Gene Structure

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Domain
Database EntryID E-Value Start end InterPro ID Description

Regulation&Interaction
Protein-protein interaction (PPI)
AmTr_scaff00239.4.v1.0.g serine acetyltransferase
AmTr_scaff00078.16.v1.0.g superfamily. Protein
AmTr_scaff00072.31.v1.0.g Belongs to the cyclin family
Regulatory gene
AmTr_scaff00001.225.v1.0.g Floral homeotic protein
AmTr_scaff00001.409.v1.0.g MADS-box protein
AmTr_scaff00001.413.v1.0.g MADS-box transcription factor

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Annotation

Orthologous Group
Orthologous ID Species Number All hits in PereRegDB Hits of this species Orthologous Detail


Pathway
Go Pathway
GO Term Description GO Category
GO:0000902 cell morphogenesis BP
GO:0003674 molecular_function MF
GO:0003824 catalytic activity MF
GO:0005488 binding MF
GO:0008150 biological_process BP
GO:0009653 anatomical structure morphogenesis BP
GO:0009719 response to endogenous stimulus BP
GO:0009725 response to hormone BP
GO:0009733 response to auxin BP
GO:0009741 response to brassinosteroid BP
GO:0009826 unidimensional cell growth BP
GO:0009987 cellular process BP
GO:0010033 response to organic substance BP
GO:0014070 response to organic cyclic compound BP
GO:0016043 cellular component organization BP
GO:0016049 cell growth BP
GO:0032501 multicellular organismal process BP
GO:0032502 developmental process BP
GO:0032989 cellular component morphogenesis BP
GO:0033993 response to lipid BP
GO:0035264 multicellular organism growth BP
GO:0040007 growth BP
GO:0042221 response to chemical BP
GO:0048037 obsolete cofactor binding MF
GO:0048589 developmental growth BP
GO:0048856 anatomical structure development BP
GO:0048869 cellular developmental process BP
GO:0050896 response to stimulus BP
GO:0051536 iron-sulfur cluster binding MF
GO:0051540 metal cluster binding MF
GO:0060560 developmental growth involved in morphogenesis BP
GO:0071840 cellular component organization or biogenesis BP
GO:1901700 response to oxygen-containing compound BP